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Community diversity metrics, interactions, and metabolic functions of bacteria associated with municipal solid waste landfills at different maturation stages Microbiologyopen (IF 3.142) Pub Date : 2020-12-12 Lerato Sekhohola‐Dlamini; Ramganesh Selvarajan; Henry Joseph Odour Ogola; Memory Tekere
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Identification of a conserved N‐terminal domain in the first module of ACV synthetases Microbiologyopen (IF 3.142) Pub Date : 2021-01-15 Riccardo Iacovelli; László Mózsik; Roel A.L. Bovenberg; Arnold J.M. Driessen
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Characterization of the microbiota and chemical properties of pork loins during dry aging Microbiologyopen (IF 3.142) Pub Date : 2021-01-07 Akihito Endo; Ryosuke Koizumi; Yozo Nakazawa; Yuh Shiwa; Shintaro Maeno; Yoshihiko Kido; Tomohiro Irisawa; Yoshiki Muramatsu; Kotaro Tada; Masao Yamazaki; Takao Myoda
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Characteristics of DNA polymerase I from an extreme thermophile, Thermus scotoductus strain K1 Microbiologyopen (IF 3.142) Pub Date : 2021-01-07 Ani Saghatelyan; Hovik Panosyan; Armen Trchounian; Nils‐Kåre Birkeland
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Temporal transcriptomes of a marine cyanopodovirus and its Synechococcus host during infection Microbiologyopen (IF 3.142) Pub Date : 2020-12-30 Sijun Huang; Yingting Sun; Si Zhang; Lijuan Long
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Isolation and characterization of fast‐growing green snow bacteria from coastal East Antarctica Microbiologyopen (IF 3.142) Pub Date : 2020-12-29 Margarita Smirnova; Uladzislau Miamin; Achim Kohler; Leonid Valentovich; Artur Akhremchuk; Anastasiya Sidarenka; Andrey Dolgikh; Volha Shapaval
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Effect of storage, temperature, and extraction kit on the phylogenetic composition detected in the human milk microbiota Microbiologyopen (IF 3.142) Pub Date : 2020-12-29 Katriona E. Lyons; Fiona Fouhy; Carol-Anne O’ Shea; C. Anthony Ryan; Eugene M. Dempsey; R. Paul Ross; Catherine Stanton
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Hidden heterogeneity and co‐occurrence networks of soil prokaryotic communities revealed at the scale of individual soil aggregates Microbiologyopen (IF 3.142) Pub Date : 2020-12-25 Márton Szoboszlay; Christoph C. Tebbe
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Circulation of an atypical hepatitis C virus (HCV) strain at a dialysis unit in northeast India Microbiologyopen (IF 3.142) Pub Date : 2020-12-24 Deepjyoti Kalita; Sangeeta Deka; Kailash Chamuah
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Microbiota succession during aerobic stability of maize silage inoculated with Lentilactobacillus buchneri NCIMB 40788 and Lentilactobacillus hilgardii CNCM‐I‐4785 Microbiologyopen (IF 3.142) Pub Date : 2020-12-24 Pascal Drouin; Julien Tremblay; Justin Renaud; Emmanuelle Apper
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Multiple plasmid origin‐of‐transfer regions might aid the spread of antimicrobial resistance to human pathogens Microbiologyopen (IF 3.142) Pub Date : 2020-10-27 Jan Zrimec
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Assessment of carbapenem‐resistant Enterobacteriaceae—plate formula and quality control procedure Microbiologyopen (IF 3.142) Pub Date : 2020-11-09 Thanh C. Tran; Binh T. Pham; Van H. Pham; The A. Ngo; Håkan Hanberger; Mattias Larsson; Linus Olson
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Analysis of the vaginal microbiome of giant pandas using metagenomics sequencing Microbiologyopen (IF 3.142) Pub Date : 2020-11-18 Lan Zhang; Caiwu Li; Yaru Zhai; Lan Feng; Keke Bai; Zhizhong Zhang; Yan Huang; Ti Li; Desheng Li; Hao Li; Pengfei Cui; Danyu Chen; Hongning Wang; Xin Yang
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Bacterioplankton response to nitrogen and dissolved organic matter produced from salmon mucus Microbiologyopen (IF 3.142) Pub Date : 2020-11-24 Verónica Molina; Camila Fernández
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A low‐cost pipeline for soil microbiome profiling Microbiologyopen (IF 3.142) Pub Date : 2020-11-22 Anita Bollmann‐Giolai; Michael Giolai; Darren Heavens; Iain Macaulay; Jacob Malone; Matthew D. Clark
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Gene expression responses to Zika virus infection in peripheral blood mononuclear cells from pregnant and non‐pregnant women Microbiologyopen (IF 3.142) Pub Date : 2020-11-19 Shen Jean Lim; Andreas Seyfang; Samia Dutra; Bradley Kane; Maureen Groer
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Proteome profiling and vector yield optimization in a recombinant adeno‐associated virus‐producing yeast model Microbiologyopen (IF 3.142) Pub Date : 2020-11-09 Juan Jose Aponte‐Ubillus; Daniel Barajas; Harry Sterling; Ali Aghajanirefah; Cameron Bardliving; Joseph Peltier; Parviz Shamlou; Mimi Roy; Daniel Gold
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Tetrachloroethene respiration in Sulfurospirillum species is regulated by a two‐component system as unraveled by comparative genomics, transcriptomics, and regulator binding studies Microbiologyopen (IF 3.142) Pub Date : 2020-11-26 Jens Esken; Tobias Goris; Jennifer Gadkari; Thorsten Bischler; Konrad U. Förstner; Cynthia M. Sharma; Gabriele Diekert; Torsten Schubert
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Skin and stinger bacterial communities in two critically endangered rays from the South Atlantic in natural and aquarium settings Microbiologyopen (IF 3.142) Pub Date : 2020-11-23 Fernanda Gonçalves e Silva; Henrique Fragoso dos Santos; Deborah Catharine de Assis Leite; Daniela Silva Lutfi; Marcelo Vianna; Alexandre Soares Rosado
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Mobile fosfomycin resistance genes in Enterobacteriaceae—An increasing threat Microbiologyopen (IF 3.142) Pub Date : 2020-10-30 Katrin Zurfluh; Andrea Treier; Kira Schmitt; Roger Stephan
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Corrigendum: PasT of Escherichia coli sustains antibiotic tolerance and aerobic respiration as a bacterial homolog of mitochondrial Coq10 Microbiologyopen (IF 3.142) Pub Date : 2020-12-22
This article corrects the following: Cinzia Fino, Martin Vestergaard, Hanne Ingmer, Fabien Pierrel, Kenn Gerdes, Alexander Harms Correction regarding Escherichia coli O157:H7 strain EDL933 When revisiting the different enterobacterial strains used in our article (Fino et al., 2020), we discovered that Escherichia coli O157:H7 strain EDL933 had been misidentified. As outlined in the original article
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Efficacy of Lactiplantibacillus plantarum 299 and 299v against nosocomial oropharyngeal pathogens in vitro and as an oral prophylactic treatment in a randomized, controlled clinical trial Microbiologyopen (IF 3.142) Pub Date : 2020-12-22 Anna Tranberg; Bengt Klarin; Julia Johansson; Lisa I. Påhlman
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Drug repurposing: Antimicrobial and antibiofilm effects of penfluridol against Enterococcus faecalis Microbiologyopen (IF 3.142) Pub Date : 2020-12-20 Xianghai Zeng; Pengfei She; Linying Zhou; Shijia Li; Zubair Hussain; Lihua Chen; Yong Wu
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Deeper below the surface—transcriptional changes in selected genes of Clostridium beijerinckii in response to butanol shock Microbiologyopen (IF 3.142) Pub Date : 2020-12-14 Petra Patakova; Jan Kolek; Katerina Jureckova; Barbora Branska; Karel Sedlar; Maryna Vasylkivska; Ivo Provaznik
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Epipelagic microbiome of the Small Aral Sea: Metagenomic structure and ecological diversity Microbiologyopen (IF 3.142) Pub Date : 2020-12-11 Madina Alexyuk; Andrey Bogoyavlenskiy; Pavel Alexyuk; Yergali Moldakhanov; Vladimir Berezin; Ilya Digel
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Pantoea ananatis carotenoid production confers toxoflavin tolerance and is regulated by Hfq‐controlled quorum sensing Microbiologyopen (IF 3.142) Pub Date : 2020-12-02 Okhee Choi; Byeongsam Kang; Yongsang Lee; Yeyeong Lee; Jinwoo Kim
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A Pichia biosensor for high‐throughput analyses of compounds that can influence mosquito behavior Microbiologyopen (IF 3.142) Pub Date : 2020-12-02 Julia Nogueira Varela; Vikramaditya G. Yadav
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Associations between phenotypic characteristics and clinical parameters of broilers and intestinal microbial development throughout a production cycle: A field study Microbiologyopen (IF 3.142) Pub Date : 2020-10-17 Jannigje G. Kers; Jean E. de Oliveira; Egil A. J. Fischer; Monique H. G. Tersteeg‐Zijderveld; Prokopis Konstanti; Jan Arend (Arjan) Stegeman; Hauke Smidt; Francisca C. Velkers
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The effect of sulfamonomethoxine treatment on the gut microbiota of Nile tilapia (Oreochromis niloticus). Microbiologyopen (IF 3.142) Pub Date : 2020-09-23 Junchao Ming,Zhengyi Fu,Zhenhua Ma,Lijun Zhou,Zongli Zhang,Chao Song,Xinhua Yuan,Qinglong Wu
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Correlations between available primary amines, endospore coat thickness, and alkaline glutaraldehyde sensitivity for spores of select Bacillus species Microbiologyopen (IF 3.142) Pub Date : 2020-09-29 Jacob Kent Player; Justen Thalmus Despain; Richard A. Robison
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Dynamic change of the gastrointestinal bacterial ecology in cows from birth to adulthood Microbiologyopen (IF 3.142) Pub Date : 2020-10-09 Chun Y. Guo; Shou K. Ji; Hui Yan; Ya J. Wang; Jing J. Liu; Zhi J. Cao; Hong J. Yang; Wen J. Zhang; Sheng L. Li
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Identifying the best regimen for primary eradication of Helicobacter pylori: analysis of 240 cases Microbiologyopen (IF 3.142) Pub Date : 2020-10-07 Yao Chen; Qingyi Liu; Fulian Hu; Jizheng Ma
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Molecular epidemiology of Candida tropicalis isolated from urogenital tract infections. Microbiologyopen (IF 3.142) Pub Date : 2020-09-27 Qianyu Wang,Congrong Li,Dongling Tang,Kewen Tang
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Raman spectra‐based deep learning: A tool to identify microbial contamination Microbiologyopen (IF 3.142) Pub Date : 2020-10-16 Murali K. Maruthamuthu; Amir Hossein Raffiee; Denilson Mendes De Oliveira; Arezoo M. Ardekani; Mohit S. Verma
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Bacterial‐like nitric oxide synthase in the haloalkaliphilic archaeon Natronomonas pharaonis Microbiologyopen (IF 3.142) Pub Date : 2020-10-14 Silvia S. Orsini; Kimberly L. James; Destiny J. Reyes; Ricardo L. Couto‐Rodriguez; Miriam K. Gulko; Angela Witte; Ronan K. Carroll; Kelly C. Rice
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Production and characterization of the 13C/15N single‐labeled insecticidal protein Cry1Ab/Ac using recombinant Escherichia coli Microbiologyopen (IF 3.142) Pub Date : 2020-10-15 Zibo Wang; Cong Hu; Yu Sun; Wei Jiang; Guogan Wu; Aihu Pan; Peng Li; Xueming Tang
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Molecular characterization of clinical isolates from vascular access infection: A single‐institution study Microbiologyopen (IF 3.142) Pub Date : 2020-10-01 Yuan‐Hsi Tseng; Min Yi Wong; Tsung‐Yu Huang; Bor‐Shyh Lin; Chun‐Wu Tung; Yao‐Kuang Huang
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Pentaplex real-time PCR for differential detection of Yersinia pestis and Y. pseudotuberculosis and application for testing fleas collected during plague epizootics. Microbiologyopen (IF 3.142) Pub Date : 2020-08-12 Ying Bai,Vladimir Motin,Russell E Enscore,Lynn Osikowicz,Maria Rosales Rizzo,Andrias Hojgaard,Michael Kosoy,Rebecca J Eisen
Upon acquiring two unique plasmids (pMT1 and pPCP1) and genome rearrangement during the evolution from Yersinia pseudotuberculosis, the plague causative agent Y. pestis is closely related to Y. pseudotuberculosis genetically but became highly virulent. We developed a pentaplex real‐time PCR assay that not only detects both Yersinia species but also differentiates Y. pestis strains regarding their plasmid
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Detection of Arcobacter species in different intestinal compartments of broiler chicken during slaughter and processing. Microbiologyopen (IF 3.142) Pub Date : 2020-08-24 Antje Schönknecht,Thomas Alter,Greta Gölz
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Role of the microbiota in ileitis of a mouse model of inflammatory bowel disease-Glutathione peroxide isoenzymes 1 and 2-double knockout mice on a C57BL background. Microbiologyopen (IF 3.142) Pub Date : 2020-08-18 Fong-Fong Chu,R Steven Esworthy,Binghui Shen,James H Doroshow
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Distribution of microbiota across different intestinal tract segments of a stranded dwarf minke whale, Balaenoptera acutorostrata. Microbiologyopen (IF 3.142) Pub Date : 2020-08-12 Jiashen Tian,Jing Du,Zhichuang Lu,Jiabo Han,Zhen Wang,Duohui Li,Xiaoyan Guan,Zhaohui Wang
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Coaggregation properties of trimeric autotransporter adhesins. Microbiologyopen (IF 3.142) Pub Date : 2020-08-30 Hawzeen S Khalil,Jonas Øgaard,Jack C Leo
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Evaluation of two xenobiotic reductases from Pseudomonas putida for their suitability for magnetic nanoparticle‐directed enzyme prodrug therapy as a novel approach to cancer treatment Microbiologyopen (IF 3.142) Pub Date : 2020-09-26 Patrick Ball; Jennifer Halliwell; Simon Anderson; Vanessa Gwenin; Christopher Gwenin
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Microbial interaction between the succinate-utilizing bacterium Phascolarctobacterium faecium and the gut commensal Bacteroides thetaiotaomicron. Microbiologyopen (IF 3.142) Pub Date : 2020-08-28 Nao Ikeyama,Takumi Murakami,Atsushi Toyoda,Hiroshi Mori,Takao Iino,Moriya Ohkuma,Mitsuo Sakamoto
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Recombinant expression of an l-amino acid oxidase from the fungus Hebeloma cylindrosporum in Pichia pastoris including fermentation. Microbiologyopen (IF 3.142) Pub Date : 2020-08-27 Marc Christian Heß,Svenja Bloess,Joe Max Risse,Karl Friehs,Gabriele Fischer von Mollard
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In vitro reconstitution and characterization of pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase hybrid complex from Corynebacterium glutamicum. Microbiologyopen (IF 3.142) Pub Date : 2020-08-30 Hirokazu Kinugawa,Naoko Kondo,Ayano Komine-Abe,Takeo Tomita,Makoto Nishiyama,Saori Kosono
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A preliminary examination of the bacterial, archaeal, and fungal rhizosphere microbiome in healthy and Phellinus noxius-infected trees. Microbiologyopen (IF 3.142) Pub Date : 2020-09-24 Karen Sze Wing Tsang,Man Kit Cheung,Regent Yau Ching Lam,Hoi Shan Kwan
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A novel gingipain regulatory gene in Porphyromonas gingivalis mediates host cell detachment and inhibition of wound closure Microbiologyopen (IF 3.142) Pub Date : 2020-10-13 Hongyan Liu; Lijia Huang; Yanling Cai; Floris J. Bikker; Xi Wei; Dong Mei Deng
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Cover Image Microbiologyopen (IF 3.142) Pub Date : 2020-09-28 Nancy Weiland‐Bräuer; Daniela Prasse; Annika Brauer; Cornelia Jaspers; Thorsten B. H. Reusch; Ruth A. Schmitz
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Biofilm formation in Acinetobacter baumannii was inhibited by PAβN while it had no association with antibiotic resistance. Microbiologyopen (IF 3.142) Pub Date : 2020-07-22 Lihua Chen,Haixia Li,Haichu Wen,Binyu Zhao,Yujia Niu,Qianqian Mo,Yong Wu
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Snow microbiome functional analyses reveal novel aspects of microbial metabolism of complex organic compounds. Microbiologyopen (IF 3.142) Pub Date : 2020-08-06 Chengsheng Zhu,Maximilian Miller,Nicholas Lusskin,Benoît Bergk Pinto,Lorrie Maccario,Max Häggblom,Timothy Vogel,Catherine Larose,Yana Bromberg
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Phylogeography of the marine pathogen, Vibrio vulnificus, revealed the ancestral scenarios of its evolution. Microbiologyopen (IF 3.142) Pub Date : 2020-08-10 Naiel Bisharat,Yael Koton,James D Oliver
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Hexyl gallate for the control of citrus canker caused by Xanthomonas citri subsp citri. Microbiologyopen (IF 3.142) Pub Date : 2020-08-06 Lúcia B Cavalca,Caio F C Zamuner,Luiz L Saldanha,Carlos R Polaquini,Luis O Regasini,Franklin Behlau,Henrique Ferreira
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The incidence of antibiotic resistance within and beyond the agricultural ecosystem: A concern for public health. Microbiologyopen (IF 3.142) Pub Date : 2020-07-25 Chidozie D Iwu,Lise Korsten,Anthony I Okoh
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Diagnosis of Helicobacter pylori infection in the elderly using an immunochromatographic assay-based stool antigen test. Microbiologyopen (IF 3.142) Pub Date : 2020-07-14 Yingjie Han,Wei Dai,Fansen Meng,Xueyang Gan,Miao Liu,Xinli Deng,Yuan Li,Gangshi Wang
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Captivity affects diversity, abundance, and functional pathways of gut microbiota in the northern grass lizard Takydromus septentrionalis. Microbiologyopen (IF 3.142) Pub Date : 2020-07-14 Jin Zhou,Yu-Tian Zhao,Ying-Yu Dai,Yi-Jin Jiang,Long-Hui Lin,Hong Li,Peng Li,Yan-Fu Qu,Xiang Ji
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Pseudomonas glycinae sp. nov. isolated from the soybean rhizosphere. Microbiologyopen (IF 3.142) Pub Date : 2020-07-12 Jiayuan Jia,Xiaoqiang Wang,Peng Deng,Lin Ma,Sonya M Baird,Xiangdong Li,Shi-En Lu
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The cytotoxic synergy between Clostridioides difficile toxin B and proinflammatory cytokines: an unholy alliance favoring the onset of Clostridioides difficile infection and relapses. Microbiologyopen (IF 3.142) Pub Date : 2020-07-12 Gabrio Bassotti,Andrea Marchegiani,Pierfrancesco Marconi,Katia Fettucciari
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Cultivable microbiota associated with Aurelia aurita and Mnemiopsis leidyi. Microbiologyopen (IF 3.142) Pub Date : 2020-07-11 Nancy Weiland-Bräuer,Daniela Prasse,Annika Brauer,Cornelia Jaspers,Thorsten B H Reusch,Ruth A Schmitz
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Small noncoding RNA sRNA0426 is involved in regulating biofilm formation in Streptococcus mutans. Microbiologyopen (IF 3.142) Pub Date : 2020-07-06 Luoping Yin,Wenhui Zhu,Dongru Chen,Yan Zhou,Huancai Lin