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Discovery of Novel Indoleaminopyrimidine NIK Inhibitors based on Molecular Docking-based Support Vector Regression (SVR) Model
Chemical Physics Letters ( IF 2.8 ) Pub Date : 2019-01-23 , DOI: 10.1016/j.cplett.2019.01.031
Qing Ye , Qiu Li , Anhui Gao , Huazhou Ying , Gang Cheng , Jing Chen , Jinxin Che , Jia Li , Xiaowu Dong , Yubo Zhou

A set of NF-κB-inducing kinase (NIK) inhibitors was used to develop a molecular docking-based QSAR model by using nonlinear regression method. The accuracy of the QSAR model was remarkably improved by integrating the docking scores and key interaction profiles. Two indole-aminopyrimidine derivatives 32a and 32b predicted as NIK inhibitors were synthesized and biologically evaluated. The significant correlationship between experimental data and MD-SVR model-predicted results were observed. The binding mode of 32a and 32b with NIK were further investigated by dynamic simulations. Compound 32b was proposed as a promising lead for the findings of highly potent inhibitors.



中文翻译:

基于基于分子对接的支持向量回归(SVR)模型的新型吲哚氨基嘧啶NIK抑制剂的发现

通过使用非线性回归方法,使用一组NF-κB诱导激酶(NIK)抑制剂来建立基于分子对接的QSAR模型。通过整合对接得分和关键交互配置文件,QSAR模型的准确性得到了显着提高。合成了两种被预测为NIK抑制剂的吲哚-氨基嘧啶衍生物32a32b,并对其进行了生物学评估。观察到实验数据和MD-SVR模型预测的结果之间的显着相关性。通过动态模拟进一步研究了32a32b与NIK的结合模式。化合物32b被认为是发现高效抑制剂的有前途的先导。

更新日期:2019-01-23
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