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Vibrio taketomensis sp. nov. by genome taxonomy.
Systematic and Applied Microbiology ( IF 3.4 ) Pub Date : 2019-12-10 , DOI: 10.1016/j.syapm.2019.126048
Mami Tanaka 1 , Bi Hongyu 1 , Chunqi Jiang 1 , Sayaka Mino 1 , Pedro Milet Meirelles 2 , Fabiano Thompson 3 , Bruno Gomez-Gil 4 , Tomoo Sawabe 1
Affiliation  

Two novel strains C4III282T and C4III291 were isolated from seawater collected a site off the Taketomi coral reef. Phylogenetic analysis based on the 16S rRNA sequences revealed that the two strains belong to the genus Vibrio. MLSA using eight protein-coding genes (ftsZ, gapA, gyrB, mreB, pyrH, recA, rpoA, and topA) showed that C4III282T and C4III291 are closely related to the members of the Ponticus clade, namely Vibrio panuliri JCM 19500T, Vibrio ponticus DSM 16217T, and “Vibrio rhodolitus” G98. ANI and in silico DDH values with members of the Ponticus clade were 77.6-78.7% and 22.2-23.1, respectively. The name Vibrio taketomensis sp. nov. is proposed with C4III282T (CAIM 1928T = DSM 106943T = JCM 33434T) as the type strain.



中文翻译:

taketomensis sp。十一月 按基因组分类。

从竹富珊瑚礁附近采集的海水中分离出两个新菌株C4III282 T和C4III291。根据16S rRNA序列的系统发育分析表明,这两个菌株属于弧菌属。使用8个蛋白质编码基因(ftsZgapAgyrBmreBpyrHrecArpoAtopA)进行的MLSA显示C4III282 T和C4III291与Ponticus进化枝的成员紧密相关,即Panbrus Viulio panuliri JCM 19500 TVibrio ponticus DSM 16217T和“ Rhodolitus弧菌” G98。庞蒂克斯进化支成员的ANI和计算机模拟DDH值分别为77.6-78.7%和22.2-23.1。名称为弧菌taketomensis sp。十一月 建议使用C4III282 T(CAIM 1928 T  = DSM 106943 T  = JCM 33434 T)作为类型应变。

更新日期:2019-12-10
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