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Adaptation in Living Systems
Annual Review of Condensed Matter Physics ( IF 22.6 ) Pub Date : 2018-03-12 00:00:00 , DOI: 10.1146/annurev-conmatphys-033117-054046
Yuhai Tu 1 , Wouter-Jan Rappel 2
Affiliation  

Adaptation refers to the biological phenomenon where living systems change their internal states in response to changes in their environments in order to maintain certain key functions critical for their survival and fitness. Adaptation is one of the most ubiquitous and arguably one of the most fundamental properties of living systems. It occurs throughout all biological scales, from adaptation of populations of species over evolutionary time to adaptation of a single cell to different environmental stresses during its life span. In this article, we review some of the recent progress made in understanding molecular mechanisms of cellular-level adaptation. We take the minimalist (or the physicist) approach and study the simplest systems that exhibit generic adaptive behaviors, namely chemotaxis in bacterium cells (Escherichia coli) and eukaryotic cells (Dictyostelium). We focus on understanding the basic biochemical interaction networks that are responsible for adaptation dynamics. By combining theoretical modeling with quantitative experimentation, we demonstrate universal features in adaptation as well as important differences in different cellular systems. Future work in extending the modeling framework to study adaptation in more complex systems such as sensory neurons is also discussed.

中文翻译:


适应生命系统

适应是指生物现象,其中,生命系统响应其环境的变化而改变其内部状态,以维持对其生存和适应性至关重要的某些关键功能。适应是生命系统最普遍且最基本的特性之一。它发生在所有生物尺度上,从进化过程中物种种群的适应性到单个细胞在其生命周期中适应不同环境压力的过程均如此。在本文中,我们回顾了在了解细胞水平适应的分子机制方面取得的一些最新进展。我们采用极简主义(或物理学家)方法,研究表现出一般适应性行为的最简单系统,即细菌细胞的趋化性(大肠杆菌(Escherichia coli)和真核细胞(Dictyostelium)。我们专注于理解负责适应动力学的基本生化相互作用网络。通过将理论模型与定量实验相结合,我们展示了适应性的通用特征以及不同细胞系统中的重要差异。还讨论了扩展建模框架以研究诸如感觉神经元之类的更复杂系统中的适应性的未来工作。

更新日期:2018-03-12
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