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Genus for biomolecules.
Nucleic Acids Research ( IF 14.9 ) Pub Date : 2020-01-08 , DOI: 10.1093/nar/gkz845
Paweł Rubach 1, 2 , Sebastian Zajac 2 , Borys Jastrzebski 1 , Joanna I Sulkowska 1, 3 , Piotr Sułkowski 4, 5
Affiliation  

The 'Genus for biomolecules' database (http://genus.fuw.edu.pl) collects information about topological structure and complexity of proteins and RNA chains, which is captured by the genus of a given chain and its subchains. For each biomolecule, this information is shown in the form of a genus trace plot, as well as a genus matrix diagram. We assemble such information for all and RNA structures deposited in the Protein Data Bank (PDB). This database presents also various statistics and extensive information about the biological function of the analyzed biomolecules. The database is regularly self-updating, once new structures are deposited in the PDB. Moreover, users can analyze their own structures.

中文翻译:

生物分子属。

“生物分子属”数据库(http://genus.fuw.edu.pl)收集有关蛋白质和RNA链的拓扑结构和复杂性的信息,这些信息由给定链及其子链的属捕获。对于每种生物分子,该信息以迹线图和矩阵图的形式显示。我们收集所有此类信息以及蛋白质数据库(PDB)中存放的RNA结构。该数据库还提供有关所分析生物分子的生物学功能的各种统计数据和广泛信息。一旦有新的结构存储在PDB中,该数据库就会定期进行自我更新。而且,用户可以分析自己的结构。
更新日期:2020-01-06
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