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Discovery of novel 7,7-dimethyl-6,7-dihydro-5H-pyrrolo[3,4-d]pyrimidines as ATR inhibitors based on structure-based drug design
European Journal of Medicinal Chemistry ( IF 6.7 ) Pub Date : 2022-11-26 , DOI: 10.1016/j.ejmech.2022.114945
Yinliang Qi 1 , Kun Wang 1 , Bin Long 1 , Hao Yue 1 , Yongshuo Wu 1 , Dexiao Yang 2 , Minghui Tong 2 , Xuan Shi 2 , Yunlei Hou 1 , Yanfang Zhao 1
Affiliation  

ATR kinase is essential to the viability of replicating cells responding to the accumulation of single-strand breaks in DNA, which is an attractive anticancer drug target based on synthetic lethality. Herein we design, synthesize, and evaluate a novel series of fused pyrimidine derivatives as ATR inhibitors. As a result, compound 48f, with an IC50 value of 0.0030 μM against ATR, displayed strong monotherapy efficacy in ataxia-telangiectasia mutated (ATM) kinase-deficient tumor cells LoVo, SW620, OVCAR-3 cell lines with IC50 values of 0.040 μM, 0.095 μM, 0.098 μM, respectively. More importantly, the combination of 48f with AZD-1390, cisplatin, oxaliplatin, and olaparib respectively resulted in synergistic activity against HT-29, HCT116, A549, MCF-7, MDA-MB-231 cells. Moreover, 48f showed a favorable pharmacokinetic profile with a bioavailability of 30.0% in SD rats, acceptable PPB, high permeability (Papp A to B = 8.23 cm s−1 × 10−6), and low risk of drug-drug interactions. Collectively, compound 48f could be a promising compound for further investigation.



中文翻译:

基于结构药物设计发现新型 7,7-二甲基-6,7-二氢-5H-吡咯并 [3,4-d] 嘧啶作为 ATR 抑制剂

ATR 激酶对于响应 DNA 中单链断裂积累的复制细胞的活力至关重要,这是一种基于合成致死性的有吸引力的抗癌药物靶标。在此,我们设计、合成和评估了一系列新型稠合嘧啶衍生物作为 ATR 抑制剂。结果,针对 ATR的 IC 50值为 0.0030 μM的化合物48f在共济失调-毛细血管扩张症突变 (ATM) 激酶缺陷型肿瘤细胞 LoVo、SW620、OVCAR-3 细胞系中显示出强大的单一疗法功效,IC 50值为 0.040分别为 μM、0.095 μM、0.098 μM。更重要的是,48fAZD-1390顺铂奥沙利铂联合使用olaparib分别对 HT-29、HCT116、A549、MCF-7、MDA-MB-231 细胞产生协同活性。此外,48f显示出良好的药代动力学特征,在 SD 大鼠中的生物利用度为 30.0%、可接受的 PPB、高渗透性(P app A 至 B = 8.23 cm s -1  × 10 -6)以及药物-药物相互作用的低风险。总的来说,化合物48f可能是一种有希望进行进一步研究的化合物。

更新日期:2022-11-30
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