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Immunodominant MHC-II (Major Histocompatibility Complex II) Restricted Epitopes in Human Apolipoprotein B
Circulation Research ( IF 20.1 ) Pub Date : 2022-06-29 , DOI: 10.1161/circresaha.122.321116
Payel Roy 1 , John Sidney 2 , Cecilia S Lindestam Arlehamn 2 , Elizabeth Phillips 3, 4 , Simon Mallal 4, 5 , Sujit Silas Armstrong Suthahar 1 , Monica Billitti 1 , Paul Rubiro 2 , Daniel Marrama 2 , Fabrizio Drago 6 , Jenifer Vallejo 1 , Vasantika Suryawanshi 1 , Marco Orecchioni 1 , Jeffrey Makings 1 , Paul J Kim 7 , Coleen A McNamara 6 , Bjoern Peters 2, 8 , Alessandro Sette 2, 8 , Klaus Ley 1, 9
Affiliation  

Background:CD (cluster of differentiation) 4+ T-cell responses to APOB (apolipoprotein B) are well characterized in atherosclerotic mice and detectable in humans. CD4+ T cells recognize antigenic peptides displayed on highly polymorphic HLA (human leukocyte antigen)-II. Immunogenicity of individual APOB peptides is largely unknown in humans. Only 1 HLA-II-restricted epitope was validated using the DRB1*07:01-APOB3036–3050 tetramer. We hypothesized that human APOB may contain discrete immunodominant CD4+ T-cell epitopes that trigger atherosclerosis-related autoimmune responses in donors with diverse HLA alleles.Methods:We selected 20 APOB-derived peptides (APOB20) from an in silico screen and experimentally validated binding to the most commonly occurring human HLA-II alleles. We optimized a restimulation-based workflow to evaluate antigenicity of multiple candidate peptides in HLA-typed donors. This included activation-induced marker assay, intracellular cytokine staining, IFNγ (interferon gamma) enzyme–linked immunospot and cytometric bead array. High-throughput sequencing revealed TCR (T-cell receptor) clonalities of APOB-reactive CD4+ T cells.Results:Using stringent positive, negative, and crossover stimulation controls, we confirmed specificity of expansion-based protocols to detect CD4+ T cytokine responses to the APOB20 pool. Ex vivo assessment of AIM+CD4+ T cells revealed a statistically significant autoimmune response to APOB20 but not to a ubiquitously expressed negative control protein, actin. Resolution of CD4+ T responses to the level of individual peptides using IFNγ enzyme–linked immunospot led to the discovery of 6 immunodominant epitopes (APOB6) that triggered robust CD4+ T activation in most donors. APOB6-specific responding CD4+ T cells were enriched in unique expanded TCR clonotypes and preferentially expressed memory markers. Cytometric bead array analysis detected APOB6-induced secretion of both proinflammatory and regulatory cytokines. In clinical samples from patients with angiographically verified coronary artery disease, APOB6 stimulation induced higher activation and memory phenotypes and augmented secretion of proinflammatory cytokines TNF (tumor necrosis factor) and IFNγ, compared with patients with low coronary artery disease.Conclusions:Using 3 cohorts, each with ≈20 donors, we discovered and validated 6 immunodominant, HLA-II–restricted APOB epitopes. The immune response to these APOB epitopes correlated with coronary artery disease severity.

中文翻译:

人载脂蛋白 B 中的免疫显性 MHC-II(主要组织相容性复合体 II)限制性表位

背景:CD(分化簇)4 + T 细胞对 APOB(载脂蛋白 B)的反应在动脉粥样硬化小鼠中得到了很好的表征,并且在人类中也可检测到。CD4 + T 细胞识别高度多态性 HLA(人类白细胞抗原)-II 上展示的抗原肽。单个 APOB 肽的免疫原性在人类中很大程度上未知。使用 DRB1*07:01-APOB 3036 –3050四聚体仅验证了 1 个 HLA-II 限制性表位。我们假设人类 APOB 可能含有离散的免疫显性 CD4 + T 细胞表位,可在具有不同 HLA 等位基因的供体中触发动脉粥样硬化相关的自身免疫反应。方法:我们从计算机筛选中选择了 20 个 APOB 衍生肽 (APOB 20 ) 并进行了实验验证与最常见的人类 HLA-II 等位基因结合。我们优化了基于再刺激的工作流程,以评估 HLA 型供体中多种候选肽的抗原性。这包括激活诱导标记物测定、细胞内细胞因子染色、IFNγ(干扰素γ)酶联免疫斑点和细胞计数珠阵列。高通量测序揭示了 APOB 反应性 CD4 + T 细胞的 TCR(T 细胞受体)克隆。结果:使用严格的阳性、阴性和交叉刺激对照,我们确认了基于扩增的方案检测 CD4 + T 细胞因子反应的特异性到 APOB 20池。AIM + CD4 + T 细胞的离体评估揭示了对 APOB 20的统计显着的自身免疫反应,但对普遍表达的阴性对照蛋白肌动蛋白没有反应。使用 IFNγ 酶联免疫斑点解析 CD4 + T 反应对单个肽的水平,发现了 6 个免疫显性表位 (APOB 6 ),这些表位在大多数供体中触发了强烈的 CD4 + T 激活。APOB 6特异性响应 CD4 + T 细胞富含独特的扩展 TCR 克隆型并优先表达记忆标记。细胞计数珠阵列分析检测到 APOB 6诱导的促炎细胞因子和调节细胞因子的分泌。在经血管造影证实的冠状动脉疾病患者的临床样本中,APOB 6与低冠心病患者相比,刺激诱导更高的激活和记忆表型,并增加促炎细胞因子 TNF(肿瘤坏死因子)和 IFNγ 的分泌。结论:使用 3 个队列,每个队列有约 20 名供体,我们发现并验证了 6 种免疫显性、 HLA-II 限制性 APOB 表位。对这些 APOB 表位的免疫反应与冠状动脉疾病的严重程度相关。
更新日期:2022-06-29
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