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Metabolite Effect on Angiogenesis: Insights from Transcriptome Analysis
Cell Biochemistry and Biophysics ( IF 2.6 ) Pub Date : 2022-06-14 , DOI: 10.1007/s12013-022-01078-0
P Sunitha 1 , Kesavan R Arya 1 , Achuthsankar S Nair 1 , Oommen V Oommen 1 , Perumana R Sudhakaran 1
Affiliation  

Metabolic status of the cells is important in the expression of the angiogenic phenotype in endothelial cells. Our earlier studies demonstrated the effects of metabolites such as lactate, citrate and lipoxygenase products, on VEGFA-VEGFR2 signaling pathway. Though this link between metabolite status and molecular mechanisms of angiogenesis is becoming evident, it is not clear how it affects genome-level expression in endothelial cells, critical to angiogenesis. In the present study, computational analysis was carried out on the transcriptome data of 4 different datasets where HUVECs were exposed to low and high glucose, both in vitro and in vivo, and the expression of a key enzyme involved in glucose metabolism is altered. The differentially expressed genes belonging to both VEGFA-VEGFR2 signaling pathway, as well as several VEGF signature genes as hub genes were also identified. These findings suggest the metabolite dependence, particularly glucose dependence, of angiogenesis, involving modulation of genome-level expression of angiogenesis- functional genome. This is important in tumor angiogenesis where reprogramming of metabolism is critical.



中文翻译:

代谢物对血管生成的影响:转录组分析的见解

细胞的代谢状态在内皮细胞中血管生成表型的表达中很重要。我们早期的研究证明了代谢物如乳酸、柠檬酸和脂氧合酶产物对 VEGFA-VEGFR2 信号通路的影响。尽管代谢物状态与血管生成的分子机制之间的这种联系变得越来越明显,但尚不清楚它如何影响内皮细胞中基因组水平的表达,这对血管生成至关重要。在本研究中,对 4 个不同数据集的转录组数据进行了计算分析,其中 HUVEC 在体外和体内暴露于低糖和高糖,并改变了参与葡萄糖代谢的关键酶的表达。属于VEGFA-VEGFR2信号通路的差异表达基因,以及几个 VEGF 特征基因作为中枢基因也被鉴定出来。这些发现表明血管生成的代谢物依赖性,特别是葡萄糖依赖性,涉及调节血管生成功能基因组的基因组水平表达。这在新陈代谢重编程至关重要的肿瘤血管生成中很重要。

更新日期:2022-06-15
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