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Development of real-time RT-qPCR assays for the typing of two novel bluetongue virus genotypes derived from sheeppox vaccine
Journal of Virological Methods ( IF 3.1 ) Pub Date : 2021-09-15 , DOI: 10.1016/j.jviromet.2021.114288
Simon King 1 , John Flannery 1 , Carrie Batten 1 , Paulina Rajko-Nenow 1
Affiliation  

Previously, we reported the detection of two novel bluetongue virus (BTV) strains (SPvvvv/02 and SPvvvv/03), possibly representing new BTV genotypes, in a batch of sheeppox vaccine. We developed type-specific RT-qPCR assays (targeting genome segment 2) for these two new BTV strains. The limit of detection of both assays was 10 genome copies/μl and no cross-reactivity with other BTV genotypes was observed. The performance of three other BTV group-specific diagnostic assays was also tested against the putative novel genotypes. RT-qPCR assays targeting BTV segment 9 and 10 detected both strains (SPvvvv/02 and SPvvvv/03) whereas a BTV segment 1 RT-qPCR assay was unable to detect either BTV strain. The work presented here expands upon the current repertoire of RT-qPCR assays for BTV genotype determination.



中文翻译:

开发用于对源自羊痘疫苗的两种新型蓝舌病毒基因型进行分型的实时 RT-qPCR 分析

此前,我们报道了在一批羊痘疫苗中检测到两种新的蓝舌病毒 (BTV) 毒株(SPvvvv/02 和 SPvvvv/03),可能代表新的 BTV 基因型。我们为这两种新的 BTV 菌株开发了类型特异性 RT-qPCR 测定(靶向基因组片段 2)。两种测定的检测限均为 10 个基因组拷贝/μl,并且未观察到与其他 BTV 基因型的交叉反应。还针对推定的新基因型测试了其他三种 BTV 组特异性诊断测定的性能。针对 BTV 片段 9 和 10 的 RT-qPCR 测定检测到两种菌株(SPvvvv/02 和 SPvvvv/03),而 BTV 片段 1 RT-qPCR 测定无法检测任何 BTV 菌株。这里介绍的工作扩展了当前用于 BTV 基因型测定的 RT-qPCR 检测方法。

更新日期:2021-09-20
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