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Machine Learning for the Study of Plankton and Marine Snow from Images
Annual Review of Marine Science ( IF 17.3 ) Pub Date : 2022-01-03 , DOI: 10.1146/annurev-marine-041921-013023
Jean-Olivier Irisson 1 , Sakina-Dorothée Ayata 1 , Dhugal J Lindsay 2 , Lee Karp-Boss 3 , Lars Stemmann 1
Affiliation  

Quantitative imaging instruments produce a large number of images of plankton and marine snow, acquired in a controlled manner, from which the visual characteristics of individual objects and their in situ concentrations can be computed. To exploit this wealth of information, machine learning is necessary to automate tasks such as taxonomic classification. Through a review of the literature, we highlight the progress of those machine classifiers and what they can and still cannot be trusted for. Several examples showcase how the combination of quantitative imaging with machine learning has brought insights on pelagic ecology. They also highlight what is still missing and how images could be exploited further through trait-based approaches. In the future, we suggest deeper interactions with the computer sciences community, the adoption of data standards, and the more systematic sharing of databases to build a global community of pelagic image providers and users.

中文翻译:


从图像中研究浮游生物和海洋雪的机器学习

定量成像仪器产生大量浮游生物和海洋雪的图像,以受控方式获取,从中可以计算单个物体的视觉特征及其原位浓度。为了利用这些丰富的信息,机器学习对于自动化分类分类等任务是必要的。通过对文献的回顾,我们强调了这些机器分类器的进展以及它们可以和仍然不能被信任的地方。几个例子展示了定量成像与机器学习的结合如何带来对远洋生态学的见解。他们还强调了仍然缺少的内容以及如何通过基于特征的方法进一步利用图像。未来,我们建议与计算机科学界进行更深入的互动,

更新日期:2022-01-04
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