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Structure of the ancient TRPY1 channel from Saccharomyces cerevisiae reveals mechanisms of modulation by lipids and calcium
Structure ( IF 5.7 ) Pub Date : 2021-08-27 , DOI: 10.1016/j.str.2021.08.003
Tofayel Ahmed 1 , Collin R Nisler 2 , Edwin C Fluck 3 , Sanket Walujkar 4 , Marcos Sotomayor 5 , Vera Y Moiseenkova-Bell 1
Affiliation  

Transient receptor potential (TRP) channels emerged in fungi as mechanosensitive osmoregulators. The Saccharomyces cerevisiae vacuolar TRP yeast 1 (TRPY1) is the most studied TRP channel from fungi, but the structure and details of channel modulation remain elusive. Here, we describe the full-length cryoelectron microscopy structure of TRPY1 at 3.1 Å resolution in a closed state. The structure, despite containing an evolutionarily conserved and archetypical transmembrane domain, reveals distinctive structural folds for the cytosolic N and C termini, compared with other eukaryotic TRP channels. We identify an inhibitory phosphatidylinositol 3-phosphate (PI(3)P) lipid-binding site, along with two Ca2+-binding sites: a cytosolic site, implicated in channel activation and a vacuolar lumen site, implicated in inhibition. These findings, together with data from microsecond-long molecular dynamics simulations and a model of a TRPY1 open state, provide insights into the basis of TRPY1 channel modulation by lipids and Ca2+, and the molecular evolution of TRP channels.



中文翻译:

酿酒酵母古老 TRPY1 通道的结构揭示了脂质和钙的调节机制

瞬时受体电位(TRP)通道在真菌中作为机械敏感渗透调节器出现。酿酒酵母液泡 TRP酵母1 (TRPY1) 是研究最多的真菌 TRP 通道,但通道调节的结构和细节仍然难以捉摸。在这里,我们以 3.1 Å 分辨率描述了关闭状态下 TRPY1 的全长冷冻电子显微镜结构。尽管该结构包含进化上保守的原型跨膜结构域,但与其他真核 TRP 通道相比,其胞浆 N 和 C 末端显示出独特的结构折叠。我们鉴定了一个抑制性磷脂酰肌醇 3-磷酸 (PI(3)P) 脂质结合位点,以及两个 Ca 2+结合位点:一个与通道激活有关的胞质位点和一个与抑制有关的液泡腔位点。这些发现与微秒长的分子动力学模拟数据和 TRPY1 开放状态模型一起,为了解脂质和 Ca 2+调节 TRPY1 通道的基础以及 TRP 通道的分子进化提供了见解。

更新日期:2021-08-27
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