Standardizing data reporting in the research community to enhance the utility of open data for SARS-CoV-2 wastewater surveillance,Environmental Science: Water Research & Technology

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Standardizing data reporting in the research community to enhance the utility of open data for SARS-CoV-2 wastewater surveillance
Environmental Science: Water Research & Technology ( IF 5 ) Pub Date : 2021-07-16 , DOI: 10.1039/d1ew00235j
Jill S McClary-Gutierrez ₁ , Zachary T Aanderud ₂ , Mitham Al-Faliti ₃ , Claire Duvallet ₄ , Raul Gonzalez ₅ , Joe Guzman ₆ , Rochelle H Holm ₇ , Michael A Jahne ₈ , Rose S Kantor ₉ , Panagis Katsivelis ₁₀ , Katrin Gaardbo Kuhn ₁₁ , Laura M Langan ₁₂ , Cresten Mansfeldt ₁₃ , Sandra L McLellan ₁₄ , Lorelay M Mendoza Grijalva ₁₅ , Kevin S Murnane _{16,

17,

18} , Colleen C Naughton ₁₉ , Aaron I Packman ₂₀ , Sotirios Paraskevopoulos ₂₁ , Tyler S Radniecki ₂₂ , Fernando A Roman ₁₉ , Abhilasha Shrestha ₂₃ , Lauren B Stadler ₂₄ , Joshua A Steele ₂₅ , Brian M Swalla ₂₆ , Peter Vikesland ₂₇ , Brian Wartell ₂₈ , Carol J Wilusz ₂₉ , Judith Chui Ching Wong ₃₀ , Alexandria B Boehm ₁₅ , Rolf U Halden _{31,

32,

33} , Kyle Bibby ₁ , Jeseth Delgado Vela ₃

Affiliation

Department of Civil and Environmental Engineering and Earth Sciences, University of Notre Dame, Notre Dame, IN, USA.
Department of Plant and Wildlife Sciences, Brigham Young University, Provo, UT, USA.
Department of Civil and Environmental Engineering, Howard University, Washington, DC, USA.
Biobot Analytics, Inc., Cambridge, MA, USA.
Hampton Roads Sanitation District, Virginia Beach, VA, USA.
Orange County Public Health Laboratory, Newport Beach, CA, USA.
Christina Lee Brown Envirome Institute, University of Louisville, 302 E. Muhammad Ali Blvd., Louisville, KY, 40202, USA.
U.S. Environmental Protection Agency, Cincinnati, OH, USA.
Department of Civil and Environmental Engineering, University of California, Berkeley, CA, USA.
Venthic Technologies, Athens, Greece.
Department of Biostatistics and Epidemiology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Center for Reservoir and Aquatic Systems Research, Baylor University, Waco, TX, USA.
Department of Civil, Environmental, and Architectural Engineering, University of Colorado Boulder, Boulder, CO, USA.
School of Freshwater Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, USA.
Department of Civil & Environmental Engineering, Stanford University, Stanford, CA, USA.
Department of Pharmacology, Toxicology & Neuroscience, Louisiana State University Health - Shreveport, Shreveport, LA, USA.
Department of Psychiatry, Louisiana State University Health - Shreveport, Shreveport, LA, USA.
Louisiana Addiction Research Center, Louisiana State University Health - Shreveport, Shreveport, LA, USA.
Civil and Environmental Engineering, University of California, Merced, CA, USA.
Department of Civil and Environmental Engineering, Northwestern Center for Water Research, Northwestern University, Evanston, IL, USA.
KWR Water Research Institute, Nieuwegein, The Netherlands.
School of Chemical, Biological, and Environmental Engineering, Oregon State University, Corvallis, OR, USA.
Division of Environmental and Occupational Health Sciences, School of Public Health, University of Illinois Chicago, Chicago, IL, USA.
Department of Civil & Environmental Engineering, Rice University, Houston, TX, USA.
Southern California Coastal Water Research Project, Costa Mesa, CA, USA.
IDEXX Laboratories, Inc., Westbrook, ME, USA.
Department of Civil and Environmental Engineering, Virginia Tech, Blacksburg, VA, USA.
Department of Environmental Engineering, University of Maryland, Baltimore, MD, USA.
Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA.
Environmental Health Institute, National Environment Agency, Singapore.
Biodesign Center for Environmental Health Engineering, Biodesign Institute, Arizona State University, Tempe, AZ, USA.
OneWaterOneHealth, Arizona State University Foundation, Tempe, AZ, USA.
AquaVitas, LLC, Scottsdale, AZ, USA.

SARS-CoV-2 RNA detection in wastewater is being rapidly developed and adopted as a public health monitoring tool worldwide. With wastewater surveillance programs being implemented across many different scales and by many different stakeholders, it is critical that data collected and shared are accompanied by an appropriate minimal amount of meta-information to enable meaningful interpretation and use of this new information source and intercomparison across datasets. While some databases are being developed for specific surveillance programs locally, regionally, nationally, and internationally, common globally-adopted data standards have not yet been established within the research community. Establishing such standards will require national and international consensus on what meta-information should accompany SARS-CoV-2 wastewater measurements. To establish a recommendation on minimum information to accompany reporting of SARS-CoV-2 occurrence in wastewater for the research community, the United States National Science Foundation (NSF) Research Coordination Network on Wastewater Surveillance for SARS-CoV-2 hosted a workshop in February 2021 with participants from academia, government agencies, private companies, wastewater utilities, public health laboratories, and research institutes. This report presents the primary two outcomes of the workshop: (i) a recommendation on the set of minimum meta-information that is needed to confidently interpret wastewater SARS-CoV-2 data, and (ii) insights from workshop discussions on how to improve standardization of data reporting.

中文翻译：

标准化研究界的数据报告，以增强开放数据在 SARS-CoV-2 废水监测中的效用

废水中的 SARS-CoV-2 RNA 检测正在迅速开发并作为全球公共卫生监测工具。随着废水监测计划在许多不同的规模和由许多不同的利益相关者实施，收集和共享的数据必须附有适当的最少量的元信息，以便能够有意义地解释和使用这种新的信息源以及跨数据集的相互比较。。虽然正在为地方、区域、国家和国际的特定监测项目开发一些数据库，但研究界尚未建立全球采用的通用数据标准。建立此类标准需要国家和国际就 SARS-CoV-2 废水测量应包含哪些元信息达成共识。为了向研究界提出关于报告废水中 SARS-CoV-2 发生情况的最低限度信息的建议，美国国家科学基金会 (NSF) SARS-CoV-2 废水监测研究协调网络于 2 月举办了一次研讨会2021 年，参与者来自学术界、政府机构、私营公司、废水处理设施、公共卫生实验室和研究机构。本报告介绍了研讨会的两个主要成果：(i) 关于自信地解释废水 SARS-CoV-2 数据所需的一组最低元信息的建议，以及 (ii) 研讨会讨论中关于如何改进的见解数据报告标准化。

更新日期：2021-07-16

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