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Spectral concepts in genome informational analysis
Theoretical Computer Science ( IF 1.1 ) Pub Date : 2021-06-30 , DOI: 10.1016/j.tcs.2021.06.039
V. Bonnici , G. Franco , V. Manca

The concept of k-spectrum for genomes is here investigated as a basic tool to analyze genomes. Related spectral notions based on k-mers are introduced with some related mathematical properties which are relevant for informational analysis of genomes. Procedures to generate spectral segmentations of genomes are provided and are tested (under several values of length k for k-mers) on cases of real genomes, such as some human chromosomes and Saccharomyces cerevisiae.



中文翻译:

基因组信息分析中的光谱概念

这里研究了基因组k谱的概念,作为分析基因组的基本工具。介绍了基于k聚体的相关光谱概念以及一些与基因组信息分析相关的数学特性。程序,以产生提供基因组的频谱分割和被测试(根据长度的几个值ķķ聚体)上实基因组,例如一些人染色体和酿酒酵母的情况下。

更新日期:2021-06-30
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