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Risk-Based Chemical Ranking and Generating a Prioritized Human Exposome Database.
Environmental Health Perspectives ( IF 10.4 ) Pub Date : 2021-04-30 , DOI: 10.1289/ehp7722
Fanrong Zhao 1, 2 , Li Li 3 , Yue Chen 4 , Yichao Huang 5 , Tharushi Prabha Keerthisinghe 1, 2 , Agnes Chow 1, 2 , Ting Dong 5 , Shenglan Jia 1, 2 , Shipei Xing 6 , Benedikt Warth 7 , Tao Huan 6 , Mingliang Fang 1, 2, 8
Affiliation  

BACKGROUND Due to the ubiquitous use of chemicals in modern society, humans are increasingly exposed to thousands of chemicals that contribute to a major portion of the human exposome. Should a comprehensive and risk-based human exposome database be created, it would be conducive to the rapid progress of human exposomics research. In addition, once a xenobiotic is biotransformed with distinct half-lives upon exposure, monitoring the parent compounds alone may not reflect the actual human exposure. To address these questions, a comprehensive and risk-prioritized human exposome database is needed. OBJECTIVES Our objective was to set up a comprehensive risk-prioritized human exposome database including physicochemical properties as well as risk prediction and develop a graphical user interface (GUI) that has the ability to conduct searches for content associated with chemicals in our database. METHODS We built a comprehensive risk-prioritized human exposome database by text mining and database fusion. Subsequently, chemicals were prioritized by integrating exposure level obtained from the Systematic Empirical Evaluation of Models with toxicity data predicted by the Toxicity Estimation Software Tool and the Toxicological Priority Index calculated from the ToxCast database. The biotransformation half-lives (HLBs) of all the chemicals were assessed using the Iterative Fragment Selection approach and biotransformation products were predicted using the previously developed BioTransformer machine-learning method. RESULTS We compiled a human exposome database of >20,000 chemicals, prioritized 13,441 chemicals based on probabilistic hazard quotient and 7,770 chemicals based on risk index, and provided a predicted biotransformation metabolite database of >95,000 metabolites. In addition, a user-interactive Java software (Oracle)-based search GUI was generated to enable open access to this new resource. DISCUSSION Our database can be used to guide chemical management and enhance scientific understanding to rapidly and effectively prioritize chemicals for comprehensive biomonitoring in epidemiological investigations. https://doi.org/10.1289/EHP7722.

中文翻译:

基于风险的化学排名并生成优先的人类暴露数据库。

背景技术由于化学物质在现代社会中的普遍使用,人类越来越暴露于成千上万种对人体暴露的大部分有贡献的化学物质。如果建立一个全面的,基于风险的人体暴露数据库,将有利于人体暴露研究的快速发展。此外,一旦异源生物被暴露后具有明显的半衰期生物转化,单独监测母体化合物可能无法反映实际的人类暴露情况。为了解决这些问题,需要一个全面且风险优先的人类暴露数据库。目标我们的目标是建立一个全面的,以风险为优先的,包括物理化学特性以及风险预测的人体暴露数据库,并开发一种图形用户界面(GUI),该用户界面能够对我们数据库中与化学物质相关的内容进行搜索。方法我们通过文本挖掘和数据库融合建立了一个以风险为优先的综合人类暴露数据库。随后,通过对从模型的系统性经验评估中获得的暴露水平与由毒性估算软件工具预测的毒性数据和由ToxCast数据库计算出的毒理学优先级指数进行集成,对化学品进行优先级排序。使用迭代片段选择方法评估所有化学品的生物转化半衰期(HLB),并使用先前开发的BioTransformer机器学习方法预测生物转化产物。结果我们建立了一个人类暴露数据库,其中包含> 20,000种化学物质,根据概率危险商对13441种化学物质进行了优先排序,并根据风险指数对7,770种化学物质进行了优先排序,并提供了一个预测的> 95,000种代谢物的生物转化代谢物数据库。此外,还生成了基于用户交互Java软件(Oracle)的搜索GUI,以允许对此新资源进行开放访问。讨论我们的数据库可用于指导化学品管理和增进科学认识,以便快速有效地确定化学品的优先级,以便在流行病学调查中进行全面的生物监测。
更新日期:2021-04-30
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