Molecular Plant-Microbe Interactions ( IF 3.5 ) Pub Date : 2020-12-04 , DOI: 10.1094/mpmi-08-20-0245-a Fangwei Yu 1 , Wei Zhang 1 , Shenyun Wang 1 , Hong Wang 1 , Li Yu 1 , Xiaoping Zeng 2 , Zhangjun Fei 3 , Jianbin Li 1
Fusarium oxysporum f. sp. conglutinans is the causal agent of Fusarium wilt of cabbage (Brassica oleracea var. capitata L.), which results in severe yield loss. Here, we report a high-quality genome sequence of a race 1 strain (IVC-1) of F. oxysporum f. sp. conglutinans, which was assembled using a combination of PacBio long-read and Illumina short-read sequences. The assembled IVC-1 genome has a total size of 71.18 Mb, with a contig N50 length of 4.59 Mb, and encodes 23,374 predicted protein-coding genes. The high-quality genome of IVC-1 provides a valuable resource for facilitating our understanding of F. oxysporum f. sp. conglutinans–cabbage interaction.
Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
中文翻译:
尖孢镰刀菌的基因组序列 sp。卷心菜,白菜枯萎病的病原体
尖孢镰刀菌f。sp。conglutinans是卷心菜枯萎病的致病原(甘蓝变种结球甘蓝L.),其结果在严重的产量损失。在这里,我们报告了F. oxysporum f。的第1种族菌株(IVC-1)的高质量基因组序列。sp。conglutinans,使用PacBio长读和Illumina短读序列的组合进行组装。组装的IVC-1基因组总大小为71.18 Mb,重叠群N50长度为4.59 Mb,编码23374个预测的蛋白质编码基因。IVC-1的高质量基因组提供了宝贵的资源,可帮助我们了解oxysporum f.。sp。粘蛋白–白菜互动。
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