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Genome sequence analysis of the beneficial Bacillus subtilis PTA-271 isolated from a Vitis vinifera (cv. Chardonnay) rhizospheric soil: assets for sustainable biocontrol
Environmental Microbiome ( IF 7.9 ) Pub Date : 2021-01-29 , DOI: 10.1186/s40793-021-00372-3
Catarina Leal , Florence Fontaine , Aziz Aziz , Conceiçao Egas , Christophe Clément , Patricia Trotel-Aziz

Bacillus subtilis strains have been widely studied for their numerous benefits in agriculture, including viticulture. Providing several assets, B. subtilis spp. are described as promising plant-protectors against many pathogens and as influencers to adaptations in a changing environment. This study reports the draft genome sequence of the beneficial Bacillus subtilis PTA-271, isolated from the rhizospheric soil of healthy Vitis vinifera cv. Chardonnay at Champagne Region in France, attempting to draw outlines of its full biocontrol capacity. The PTA-271 genome has a size of 4,001,755 bp, with 43.78% of G + C content and 3945 protein coding genes. The draft genome of PTA-271 putatively highlights a functional swarming motility system hypothesizing a colonizing capacity and a strong interacting capacity, strong survival capacities and a set of genes encoding for bioactive substances. Predicted bioactive compounds are known to: stimulate plant growth or defenses such as hormones and elicitors, influence beneficial microbiota, and counteract pathogen aggressiveness such as effectors and many kinds of detoxifying enzymes. Plurality of the putatively encoded biomolecules by Bacillus subtilis PTA-271 genome suggests environmentally robust biocontrol potential of PTA-271, protecting plants against a broad spectrum of pathogens.

中文翻译:

葡萄(Chardonnay)根际土壤中分离的有益枯草芽孢杆菌PTA-271的基因组序列分析:可持续生物防治的资产

枯草芽孢杆菌菌株因在农业(包括葡萄栽培)中的众多益处而被广泛研究。提供几种资产,枯草芽孢杆菌。被描述为对许多病原体有希望的植物保护剂,以及在不断变化的环境中对适应的影响。这项研究报告了有益的枯草芽孢杆菌PTA-271的基因组序列草案,该序列是从健康的葡萄树葡萄的根际土壤中分离出来的。法国香槟地区的霞多丽,试图勾勒出其全部生物防治能力的轮廓。PTA-271基因组的大小为4,001,755 bp,具有43.78%的G + C含量和3945个蛋白质编码基因。PTA-271的基因组草案推测出了一个功能强大的群体运动系统,该系统假设具有殖民能力和强大的相互作用能力,强大的生存能力和一组编码生物活性物质的基因。已知预测的生物活性化合物可:刺激植物生长或防御系统(例如激素和引发剂),影响有益的微生物群以及抵消病原体的侵略性(例如效应子和多种排毒酶)。枯草芽孢杆菌PTA-271基因组推定编码的生物分子的多样性表明,PTA-271对环境具有强大的生物控制潜力,可以保护植物免受各种病原体的侵害。
更新日期:2021-01-29
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