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A Comprehensive and Contemporary “Snapshot” of β-lactamases in Carbapenem Resistant Acinetobacter baumannii
Diagnostic Microbiology and Infectious Disease ( IF 2.9 ) Pub Date : 2020-10-16 , DOI: 10.1016/j.diagmicrobio.2020.115242
Andrea M Hujer 1 , Kristine M Hujer 1 , David A Leonard 2 , Rachel A Powers 2 , Bradley J Wallar 2 , Andrew R Mack 3 , Magdalena A Taracila 1 , Philip N Rather 4 , Paul G Higgins 5 , Fabio Prati 6 , Emilia Caselli 6 , Steven H Marshall 7 , Thomas Clarke 8 , Christopher Greco 8 , Pratap Venepally 8 , Lauren Brinkac 9 , Barry N Kreiswirth 10 , Derrick E Fouts 8 , Robert A Bonomo 11 ,
Affiliation  

Successful treatment of Acinetobacter baumannii infections require early and appropriate antimicrobial therapy. One of the first steps in this process is understanding which β-lactamase (bla) alleles are present and in what combinations. Thus, we performed WGS on 98 carbapenem-resistant A. baumannii (CR Ab). In most isolates, an acquired blaOXA carbapenemase was found in addition to the intrinsic blaOXA allele. The most commonly found allele was blaOXA-23 (n=78/98). In some isolates, blaOXA-23 was found in addition to other carbapenemase alleles: blaOXA-82 (n=12/78), blaOXA-72 (n=2/78) and blaOXA-24/40 (n=1/78). Surprisingly, 20% of isolates carried carbapenemases not routinely assayed for by rapid molecular diagnostic platforms, i.e., blaOXA-82 and blaOXA-172; all had ISAba1 elements. In 8 CR Ab, blaOXA-82 or blaOXA-172 was the only carbapenemase. Both blaOXA-24/40 and its variant blaOXA-72 were each found in 6/98 isolates. The most prevalent ADC variants were blaADC-30 (21%), blaADC-162 (21%), and blaADC-212 (26%). Complete combinations are reported.



中文翻译:

耐碳青霉烯鲍曼不动杆菌中β-内酰胺酶的综合和现代“快照”

鲍曼不动杆菌感染的成功治疗需要早期和适当的抗菌治疗。该过程的第一步是了解存在哪些 β-内酰胺酶 (bla) 等位基因以及存在哪些组合。因此,我们对 98 种耐碳青霉烯类鲍曼不动杆菌 (CR Ab) 进行了 WGS。在大多数分离株中, 除了固有的 bla OXA 等位基因外,还发现了获得性的 bla OXA碳青霉烯酶。最常见的等位基因是bla OXA-23  (n=78/98)。在一些分离株中, 除了其他碳青霉烯酶等位基因外,还发现了bla OXA-23:bla OXA-82  (n=12/78)、bla OXA-72  (n=2/78) 和 bla OXA-24/40 (n=1/78)。令人惊讶的是,20% 的分离株携带的碳青霉烯酶未通过快速分子诊断平台进行常规检测,即 bla OXA-82 和 bla OXA-172;都含有 ISAba1 元素。在 8 CR Ab 中,bla OXA-82 或 bla OXA-172 是唯一的碳青霉烯酶。bla OXA-24/40 及其变体 bla OXA-72 均在 6/98 株中发现。最流行的 ADC 变体是 bla ADC-30  (21%)、bla ADC-162  (21%) 和 bla ADC-212  (26%)。报告了完整的组合。

更新日期:2020-10-17
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