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Complete chloroplast genome sequence and phylogenetic analysis of Syzygium malaccense
Mitochondrial DNA Part B ( IF 0.610 ) Pub Date : 2020-10-09 , DOI: 10.1080/23802359.2020.1829132
Liang Tao 1, 2 , Zhuo-Gong Shi 1 , Qing-Yi Long 2
Affiliation  

Abstract

Syzygium malaccense is native to Malaysia. It is sometimes called the malay apple, malay rose-apple, mountain rose-apple, mountain apple, water apple, or French cashew. The tree is very popular in many tropical and subtropical regions for its fruit and traditional medicine. The first complete chloroplast genome of Syzygium malaccense has been reported in this study. The complete chloroplast genome of Syzygium malaccense is 158,954 bp, composed of four regions: a large single-copy region with a size of 87,991 bp, a small single copy region with a size of 18,793 bp, and two inverted repeat regions with a size of 26,085 bp. The GC content is 36.97%. A total of 132 genes were annotated, including 84 encoding proteins, eight encoding rRNA genes, 37 encoding tRNA genes, and three encoding pseudo genes. Phylogenetic analysis showed that Syzygium aromaticum, Syzygium cumini, and Syzygium forrestii are closely related to Syzygium malaccense.



中文翻译:

蒲桃化学成分的完整叶绿体基因组序列和系统发育分析

摘要

Syzygium malaccense原产于马来西亚。它有时被称为马来苹果,马来玫瑰苹果,山玫瑰苹果,山苹果,水苹果或法国腰果。该树因其果实和传统药物而在许多热带和亚热带地区非常流行。这项研究报告了首个完整的疟原虫Syzygium malaccense基因组。蒲桃的完整叶绿体基因组长度为158,954 bp,由四个区域组成:一个大的单拷贝区域,大小为87,991 bp,一个小的单拷贝区域,大小为18,793 bp,以及两个反向重复区域,大小为26,085 bp。GC含量为36.97%。总共注释了132个基因,包括84个编码蛋白,8个编码rRNA基因,37个编码tRNA基因和三个编码假基因。系统发育分析表明,丁香海南蒲桃,以及蒲桃forrestii密切相关的马六甲蒲桃

更新日期:2020-10-11
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