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Comprehensive transcriptome of the maize stalk borer, Busseola fusca, from multiple tissue types, developmental stages, and parasitoid wasp exposures.
Genome Biology and Evolution ( IF 3.3 ) Pub Date : 2020-09-18 , DOI: 10.1093/gbe/evaa195
Kayla M Hardwick 1, 2 , Gladys Bosibori Bichang’a 2 , Andnet Bayleyegn Abtew 2 , Ryan Musumba Awori 2 , Leah C S Cepko 2 , Lorna Jemosop Chebon-Bore 2 , Alistair Darby 2 , Jon D deVries 1, 2 , Jonathan Filée 2 , Muna Fuad 2 , Grace Gachara 2 , Dedan K Githae 2 , Patrick Gunga 2 , Madison Held 1, 2 , Hellen Wambui Kariuki 2 , Evans Sioma Kataka 2 , Susan Diana Kerfua 2 , Kelvin Muteru Kimenyi 2 , Bruno Le Ru 2 , Ernest Mukweyi Lutomia 2 , Elizabeth Ajema Luvai 2 , Maureen K Luvanda 2 , Beatus Modest Lyimo 2 , Eunice Magoma Machuka 2 , Daniel G Maeda 2 , Solomon Maina 2 , Peterson Gitonga Mathenge 2 , Damaris Matoke-Muhia 2 , Caitlin H Miller 2 , Silviane Aoko Miruka 2 , Alfred Mitema 2 , Antoinette Aluoch Miyunga 2 , Sarah Akwabi Mukolwe 2 , Edward Kirwa Muge 2 , Simon Ngao Mule 2 , Mary Kanyiri Murithi 2 , Jean Pierre Musabyimana 2 , Saphan Muzoora 2 , Esther Wangui Mwangi 2 , Harrison Ndung'u Mwangi 2 , Nduta Mwangi 2 , Ann Njeri Mwaura 2 , Nelly Ndungu 2 , Bidii Stephen Ngalah 2 , Peter Njenga Ng'ang'a 2 , Harun N Njoroge 2 , Brenda Nyaboke Nyandika 2 , Johnson Ounya Nyasani 2 , Faith Akinyi Obange 2 , Shem Joabh Ochieng 2 , Willingtone Otieno Odhiambo 2 , Hellen Adhiambo Ogot 2 , Maureiq Awino Edith Ojwang’ 2 , Fred Odhiambo Osowo 2 , Billy Omboki Ratemo 2 , Tolbert Sonda 2 , Alexander Ssamula 2 , Sharon Towett-Kirui 2 , Augustin Penda Twizerimana 2 , Kelvin Mwangi Wachiuri 2 , Alex Paul Wacoo 2 , Kevin Wamae 2 , Mark Kilongosi Webale 2 , Reuben Mangi Yaa 2 , Dawn E Gunderson-Rindal 2 , Francesca Stomeo 2 , Appolinaire Djikeng 2 , Paul-Andre Calatayud 2 , Sarah Schaack 1, 2
Affiliation  

Busseola fusca (Fuller) (Lepidoptera: Noctuidae), the maize stalk borer, is a widespread crop pest in sub-Saharan Africa that has been the focus of biological research and intensive management strategies. Here, we present a comprehensive annotated transcriptome of B. fusca (originally collected in the Western Province of Kenya) based on ten pooled libraries including a wide array of developmental stages, tissue types, and exposures to parasitoid wasps. Parasitoid wasps have been used as a form of biocontrol to try and reduce crop losses with variable success, in part due to differential infectivities and immune responses among wasps and hosts. We identified a number of loci of interest for pest management, including genes potentially involved in chemoreception, immunity, and response to insecticides. The comprehensive sampling design used expands our current understanding of the transcriptome of this species and deepens the list of potential target genes for future crop loss mitigation, in addition to highlighting candidate loci for differential expression and functional genetic analyses in this important pest species.

中文翻译:

来自多种组织类型、发育阶段和寄生蜂暴露的玉米茎螟的综合转录组,Busseola fusca。

Busseola fusca (Fuller)(鳞翅目:夜蛾科)是一种玉米螟虫,是撒哈拉以南非洲广泛存在的作物害虫,一直是生物研究和集约化管理战略的重点。在这里,我们展示了B. fusca的综合注释转录组(最初收集于肯尼亚西部省)基于十个汇集库,包括各种发育阶段、组织类型和寄生蜂的暴露情况。寄生蜂已被用作一种生物防治形式,以尝试减少作物损失并取得不同程度的成功,部分原因是黄蜂和宿主之间的感染性和免疫反应不同。我们确定了许多害虫管理感兴趣的基因座,包括可能涉及化学感受、免疫和对杀虫剂的反应的基因。所使用的综合抽样设计扩展了我们目前对该物种转录组的理解,并加深了未来减轻作物损失的潜在目标基因列表,
更新日期:2020-09-18
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