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DEVELOPMENT AND VALIDATION OF A QUANTITATIVE PCR ASSAY FOR DETECTION OF TERRAPENE HERPESVIRUS 2 IN EASTERN BOX TURTLES (TERRAPENE CAROLINA CAROLINA).
Journal of Virological Methods ( IF 3.1 ) Pub Date : 2020-09-07 , DOI: 10.1016/j.jviromet.2020.113968
Aubrey I Engel 1 , Laura Adamovicz 2 , James F X Wellehan 3 , Matthew C Allender 2
Affiliation  

Herpesviruses are associated with disease in many chelonian species, resulting in pathology such as respiratory tract infection, stomatitis, conjunctivitis, hepatitis, and papillomatosis. Herpesvirus-associated fibropapillomas cause significant morbidity and mortality in marine turtles, and have been identified in an eastern box turtle (Terrapene carolina carolina) infected with Terrapene herpesvirus 2 (TerHV2). Further investigation is necessary to understand the impact of carcinogenic herpesviruses on chelonian health; however, reliable and specific methods for detection and quantitation of herpesviral load are lacking. The purpose of this study was to develop and validate a quantitative PCR assay for detection of TerHV2 in box turtles. TaqMan primer-probes were developed targeting the DNA polymerase gene. Inter- and intra-assay variability, linear range of detection, limit of detection, and specificity were assessed. The assay was highly specific for TerHV2, failing to amplify seven closely-related chelonian herpesviruses. It performed with high efficiency (slope = -3.52, R2 = 1, efficiency = 92.29 %), low intra-assay variability and low inter-assay variability (coefficient of variation ≤ 1.25 % at all standard dilutions). Reaction efficiency was not impacted in the presence of box turtle DNA from combined oral/cloacal swabs or whole blood. This qPCR assay has a linear range of detection from 107 to 101 viral copies per reaction and provides a valuable tool in the surveillance and characterization of TerHV2 in box turtles.



中文翻译:

用于检测东箱龟(Terrapene CAROLINA CAROLINA)中萜类疱疹病毒 2 的定量 PCR 分析的开发和验证。

疱疹病毒与许多龟类的疾病有关,导致呼吸道感染、口腔炎、结膜炎、肝炎和乳头状瘤病等病理。疱疹病毒相关的纤维乳头状瘤在海龟中引起显着的发病率和死亡率,并已在感染了Terrapene的东部箱龟(Terrapene carolina carolina)中发现疱疹病毒 2 (TerHV2)。需要进一步调查以了解致癌疱疹病毒对龟类健康的影响;然而,缺乏用于检测和定量疱疹病毒载量的可靠且特定的方法。本研究的目的是开发和验证用于检测箱龟 TerHV2 的定量 PCR 检测方法。TaqMan 引物探针是针对 DNA 聚合酶基因开发的。评估了测定间和测定内的变异性、检测的线性范围、检测限和特异性。该测定对 TerHV2 具有高度特异性,未能扩增七种密切相关的龟类疱疹病毒。它以高效率执行(斜率 = -3.52,R 2 = 1,效率 = 92.29 %),测定内变异性和测定间变异性低(变异系数≤ 1.25 % 在所有标准稀释度下)。在存在来自组合的口腔/泄殖腔拭子或全血的箱龟 DNA 的情况下,反应效率不会受到影响。该 qPCR 检测具有每次反应10 7到 10 1病毒拷贝的线性检测范围,并为箱龟中 TerHV2 的监测和表征提供了有价值的工具。

更新日期:2020-10-08
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