Introduction Plants do not grow in isolation, rather they are hosts to a variety of microbes in their natural environments. While, few thrive in the plants for their own benefit, others may have a direct impact on plants in a symbiotic manner. Unraveling plant-microbe interactions is a critical component in recognizing the positive and negative impacts of microbes on plants. Also, by affecting the environment around plants, microbes may indirectly influence plants. The progress in sequencing technologies in the genomics era and several omics tools has accelerated in biological science. Studying the complex nature of plant-microbe interactions can offer several strategies to increase the productivity of plants in an environmentally friendly manner by providing better insights. This review brings forward the recent works performed in building omics strategies that decipher the interactions between plant-microbiome. At the same time, it further explores other associated mutually beneficial aspects of plant-microbe interactions such as plant growth promotion, nitrogen fixation, stress suppressions in crops and bioremediation; as well as provides better insights on metabolic interactions between microbes and plants through omics approaches. It also aims to explore advances in the study of Arabidopsis as an important avenue to serve as a baseline tool to create models that help in scrutinizing various factors that contribute to the elaborate relationship between plants and microbes. Causal relationships between plants and microbes can be established through systematic gnotobiotic experimental studies to test hypotheses on biologically derived interactions. Conclusion This review will cover recent advances in the study of plant-microbe interactions keeping in view the advantages of these interactions in improving nutrient uptake and plant health.

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破译植物微生物相互作用的组学：观点和新见解

简介 植物不是孤立生长的，它们是自然环境中各种微生物的宿主。虽然很少有人为了自己的利益而在植物中茁壮成长，但其他人可能以共生方式对植物产生直接影响。揭示植物与微生物的相互作用是识别微生物对植物的正面和负面影响的关键组成部分。此外，通过影响植物周围的环境，微生物可能会间接影响植物。基因组学时代测序技术的进步和一些组学工具在生物科学中加速发展。研究植物-微生物相互作用的复杂性可以提供多种策略，通过提供更好的见解以环保的方式提高植物的生产力。这篇综述提出了最近在构建组学策略方面所做的工作，以破译植物-微生物组之间的相互作用。同时，它进一步探讨了植物与微生物相互作用的其他相关互利方面，如植物生长促进、固氮、作物胁迫抑制和生物修复；并通过组学方法为微生物和植物之间的代谢相互作用提供更好的见解。它还旨在探索拟南芥研究的进展，将其作为基线工具的重要途径，以创建有助于审查有助于植物和微生物之间复杂关系的各种因素的模型。植物和微生物之间的因果关系可以通过系统的生物实验研究来建立，以检验关于生物衍生相互作用的假设。结论 本综述将涵盖植物-微生物相互作用研究的最新进展，同时考虑这些相互作用在改善养分吸收和植物健康方面的优势。