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Depositing annotated sequences in GenBank: there needs to be a better way.
Briefings in Functional Genomics ( IF 4 ) Pub Date : 2020-09-04 , DOI: 10.1093/bfgp/elaa016
David Roy Smith 1
Affiliation  

Submitting sequences to the National Center for Biotechnology Information (NCBI) is an integral part of research and the publication process for many disciplines within the life sciences, and it will only become more important as sequencing technologies continue to improve. Here, I argue that the available infrastructure and resources for uploading data to NCBI—especially the associated annotations of eukaryotic genomes—are inefficient, hard to use and sometimes just plain bad. This, in turn, is causing some researchers to forgo annotations entirely in their submissions. The time is overdue for the development of sophisticated, user-friendly software for depositing annotated sequences in GenBank.

中文翻译:

将注释序列存入 GenBank:需要有更好的方法。

向国家生物技术信息中心 (NCBI) 提交序列是生命科学中许多学科研究和出版过程中不可或缺的一部分,随着测序技术的不断改进,它只会变得更加重要。在这里,我认为用于将数据上传到 NCBI 的可用基础设施和资源——尤其是真核基因组的相关注释——效率低下、难以使用,有时甚至很糟糕。这反过来又导致一些研究人员在他们的提交中完全放弃注释。开发用于在 GenBank 中存储注释序列的复杂的、用户友好的软件的时间已经过时了。
更新日期:2020-09-04
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