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A mini foxtail millet with an Arabidopsis-like life cycle as a C4 model system.
Nature Plants ( IF 18.0 ) Pub Date : 2020-08-31 , DOI: 10.1038/s41477-020-0747-7
Zhirong Yang 1, 2 , Haoshan Zhang 3 , Xukai Li 1, 4 , Huimin Shen 4 , Jianhua Gao 1, 4 , Siyu Hou 1, 5 , Bin Zhang 1, 5 , Sean Mayes 6 , Malcolm Bennett 6 , Jianxin Ma 7 , Chuanyin Wu 3 , Yi Sui 3 , Yuanhuai Han 1, 5 , Xingchun Wang 1, 4
Affiliation  

Foxtail millet (Setaria italica) is an important crop species and an emerging model plant for C4 grasses. However, functional genomics research on foxtail millet is challenging because of its long generation time, relatively large stature and recalcitrance to genetic transformation. Here we report the development of xiaomi, a rapid-cycling mini foxtail millet mutant as a C4 model system. Five to six generations of xiaomi can be grown in a year in growth chambers due to its short life cycle and small plant size, similar to Arabidopsis. A point mutation in the Phytochrome C (PHYC) gene was found to be causal for these characteristics. PHYC encodes a light receptor essential for photoperiodic flowering. A reference-grade xiaomi genome comprising 429.94 Mb of sequence was assembled and a gene-expression atlas from 11 different tissues was developed. These resources, together with an established highly efficient transformation system and a multi-omics database, make xiaomi an ideal model system for functional studies of C4 plants.



中文翻译:

具有拟南芥类生命周期的迷你谷子作为C4模型系统。

谷子(Setaria italica)是重要的农作物品种,是C 4草的新兴模式植物。然而,谷子的功能基因组学研究具有挑战性,因为它的世代时间长、体型较大且难以进行遗传转化。在这里,我们报告了小米作为 C 4模型系统的快速循环迷你谷子突变体的开发。由于小米的生命周期短,植株体型小,与拟南芥相似,一年可在生长箱中生长五到六代。光敏色素 C ( PHYC ) 中的点突变) 基因被发现与这些特征有关。PHYC编码光周期开花所必需的光受体。组装了包含 429.94 Mb 序列的参考级小米基因组,并开发了来自 11 个不同组织的基因表达图谱。这些资源,加上已建立的高效转化系统和多组学数据库,使小米成为C 4植物功能研究的理想模型系统。

更新日期:2020-08-31
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