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Complete genome sequence of Buttiauxella phage vB_ButM_GuL6.
Archives of Virology ( IF 2.7 ) Pub Date : 2020-08-14 , DOI: 10.1007/s00705-020-04780-7
Algirdas Noreika 1 , Rolandas Meškys 1 , Justas Lazutka 2 , Laura Kaliniene 1
Affiliation  

We present here the results of the analysis of the complete genome sequence of a lytic bacteriophage, vB_ButM_GuL6, which is the first virus isolated from Buttiauxella. Electron microscopy revealed that vB_ButM_GuL6 belongs to the family Myoviridae, order Caudovirales. The genome of vB_ButM_GuL6 is a linear, circularly permuted 178,039-bp dsDNA molecule with a GC content of 43.4%. It has been predicted to contain 282 protein-coding genes and two tRNA genes, tRNA-Met and tRNA-Gly. Using bioinformatics approaches, 99 (36%) of the vB_ButM_GuL6 genes were assigned a putative function. Genome-wide comparisons and phylogenetic analysis indicated that vB_ButM_GuL6 represents a new species of the subfamily Tevenvirinae and is most closely related to Escherichia virus RB43. These phages, together with Cronobacter phages Miller, CfP1, and IME-CF2, likely form a new genus within the subfamily Tevenvirinae.



中文翻译:

Buttiauxella噬菌体vB_ButM_GuL6的完整基因组序列。

我们在座的裂解噬菌体,vB_ButM_GuL6,这是从分离到的第一个病毒的完整基因组序列的分析结果布丘氏。电子显微镜显示vB_ButM_GuL6属于肌病毒科,属于拟病毒。vB_ButM_GuL6的基因组是一个线性的,环状排列的178,039-bp dsDNA分子,GC含量为43.4%。预计它包含282个蛋白质编码基因和两个tRNA基因,tRNA-Met和tRNA-Gly。使用生物信息学方法,向vB_ButM_GuL6基因中的99个(36%)分配了假定功能。全基因组比较和系统发育分析表明vB_ButM_GuL6代表Tevenvirinae亚科的一个新物种与埃希氏菌RB43关系最密切。这些噬菌体,连同噬菌体-米勒,CFP1和IME-CF2,可能形成亚科新属Tevenvirinae。

更新日期:2020-10-11
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