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New lectins from Codium isthmocladum Vickers show unique amino acid sequence and antibiofilm effect on pathogenic bacteria
Journal of Applied Phycology ( IF 3.3 ) Pub Date : 2020-07-21 , DOI: 10.1007/s10811-020-02198-x
Rômulo Farias Carneiro , Philippe Lima Duarte , Renata Pinheiro Chaves , Suzete Roberta da Silva , Ramon Rodrigues Feitosa , Bruno Lopes de Sousa , Antônio Willame da Silva Alves , Mayron Alves de Vasconcelos , Bruno Anderson Matias da Rocha , Edson Holanda Teixeira , Alexandre Holanda Sampaio , Celso Shiniti Nagano

Two new lectins from the green alga Codium isthmocladum (CiL-1 and CiL-2) were isolated. Both lectins could agglutinate human and rabbit erythrocytes. Galactosides and fetuin showed inhibitory effect on CiL-1. CiL-2 was inhibited by GalNAc and porcine stomach mucin. CiL-1 was a monomeric protein of 12 kDa, whereas CiL-2 showed 12 kDa in SDS-PAGE and an oligomeric state in gel filtration. MALDI-ToF-MS of CiL-1 revealed a molecular mass of 12.027 ± 5 Da, while CiL-2 showed molecular mass of 12.264 ± 5 Da. Ninety-eight percent of CiL-1’s primary structure was determined consisting of 112 residues placed in two repeated domains with approximately 60% of similarity. CiL-1 showed similarity with hypothetical proteins from aquatic pathogenic fungi. The N-terminal of CiL-2 showed no similarity to CiL-1 or to any known protein. The three-dimensional model of CiL-1 consists of four two-strand β-sheets disposed in a barrel-like arrangement, connected by loops of variable sizes, with a well-structured hydrophobic core. Binding site prediction suggests the existence of two independent monosaccharide binding sites in CiL-1. The lectins showed no antibacterial activity on Gram-positive and Gram-negative bacteria, but they were able to significantly inhibit the biofilm formation from Staphylococcus aureus and Staphylococcus epidermidis.



中文翻译:

维氏梭菌中的新凝集素对病原菌具有独特的氨基酸序列和抗生物膜作用

从绿藻两个新的外源凝集素刺松isthmocladum(CiL-1和CiL-2)被分离。两种凝集素均可凝集人和兔的红细胞。半乳糖苷和胎球蛋白对CiL-1具有抑制作用。CiL-2被GalNAc和猪胃粘蛋白抑制。CiL-1是12 kDa的单体蛋白,而CiL-2在SDS-PAGE中显示12 kDa,在凝胶过滤中呈寡聚状态。CiL-1的MALDI-ToF-MS显示分子量为12.027±5 Da,而CiL-2显示的分子量为12.264±5 Da。确定了98%的CiL-1一级结构,由位于两个重复域中的112个残基组成,具有大约60%的相似性。CiL-1与水生病原性真菌的假定蛋白表现出相似性。CiL-2的N端显示与CiL-1或任何已知蛋白无相似性。CiL-1的三维模型由四个呈桶状排列的两链β-折叠片组成,通过可变大小的环连接,并具有结构良好的疏水核。结合位点预测表明CiL-1中存在两个独立的单糖结合位点。凝集素对革兰氏阳性和革兰氏阴性细菌均未显示抗菌活性,但它们能够显着抑制细菌的生物膜形成。金黄色葡萄球菌表皮葡萄球菌。

更新日期:2020-08-03
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