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Complete genome sequence of Planococcus sp. PAMC21323 isolated from Antarctica and its metabolic potential to detoxify pollutants
Environmental Microbiome ( IF 7.9 ) Pub Date : 2018-11-09 , DOI: 10.1186/s40793-018-0334-y
Jong-Hyun Jung , Min-Ho Joe , Dong-Ho Kim , Hyun Park , Jong-il Choi , Sangyong Lim

The Planococcus sp. PAMC21323 is a yellow pigment-producing bacterium isolated from King George Island in Antarctica; it has a broad growth temperature range of 5–40 °C. Herein, we describe the complete genome sequence information of the genus Planococcus with its annotated sequence, genetic features for bioremediation, and oxidative stress capacity. The Planococcus sp. PAMC21323 possesses chromosomal DNA (3,196,500-bp) with plasmid DNA (3364-bp). The complete 3,199,864-bp of the genome consists of 3171 genes including 60 transfer RNAs and 24 ribosomal RNAs. Strain PAMC21323 encodes various genes associated with detoxification of heavy metal ions and aromatic hydrocarbons. Moreover, it is equipped with diverse stress response systems, which can be used to sense the internal and oxidative stresses caused by detoxification. This is the first report highlighting the genetic potential of Planococcus sp. PAMC21323 in bioremediation, suggesting application of this psychrotrophic strain in bioremediation in harsh environments.

中文翻译:

Planococcus sp。的完整基因组序列。分离自南极洲的PAMC21323及其代谢潜能以解毒污染物

葡萄球菌 PAMC21323是一种从南极洲的乔治王岛分离的黄色色素产生细菌;它的生长温度范围为5-40°C。在这里,我们描述了平球菌属的完整的基因组序列信息及其注释的序列,生物修复的遗传特征和氧化应激能力。葡萄球菌 PAMC21323具有染色体DNA(3,196,500-bp)和质粒DNA(3364-bp)。基因组的完整3,199,864-bp包含3171个基因,其中包括60个转移RNA和24个核糖体RNA。菌株PAMC21323编码与重金属离子和芳香烃解毒相关的各种基因。此外,它配备了多种压力响应系统,可用于检测排毒引起的内部和氧化应激。这是第一份突出Planococcus sp。的遗传潜力的报告。PAMC21323在生物修复中,表明该精神营养菌株在恶劣环境下的生物修复中的应用。
更新日期:2018-11-09
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