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Computational Methods in Chemistry and Biochemistry Education: Visualization of Proteins
Computing in Science & Engineering ( IF 2.1 ) Pub Date : 2020-07-01 , DOI: 10.1109/mcse.2019.2962118
Polina Pine 1 , Liudmila Ivanovna Paina 2
Affiliation  

One of the most important skills for a biochemist these days is to be able to visualize a protein, find a ligand binding site, and show the three-dimensional interactions with the coordinated amino acid residues. It is important to educate a modern student how to benefit from the up-to-date scientific data and software. It is known that the primary structure of protein is of primary information content; however, the tertiary structure is more conserved. Biochemistry students are educated in a traditional way giving an importance to developing fundamental skills as well as critical thinking. In this article, we demonstrate educational approaches that incorporate computational methods in the course Biochemistry A–CHEM 370. This approach is developed at Loyola University Chicago and is based on a pedagogical method developed at Orenburg State Medical University.

中文翻译:

化学和生物化学教育中的计算方法:蛋白质的可视化

如今,生物化学家最重要的技能之一是能够可视化蛋白质,找到配体结合位点,并显示与协调氨基酸残基的三维相互作用。教育现代学生如何从最新的科学数据和软件中受益非常重要。众所周知,蛋白质的一级结构具有一级信息含量;然而,三级结构更保守。生物化学学生以传统方式接受教育,重视培养基本技能和批判性思维。在本文中,我们展示了在 Biochemistry A–CHEM 370 课程中结合计算方法的教育方法。
更新日期:2020-07-01
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