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Fast fragmentation during surface-induced dissociation: An examination of peptide size and structure
Chemical Physics Letters ( IF 2.8 ) Pub Date : 2020-06-29 , DOI: 10.1016/j.cplett.2020.137716
George L. Barnes , Amanda Shlaferman , Monica Strain

We present the results of direct dynamics simulations of surface-induced dissociation for protonated versions of AnK, KAn (n = 1, 3, and 5), AcA7K, and AcKA7 for collisions with a fluorinated self-assembled monolayer surface. We focus on elucidating fast fragmentation events, which takes place in coincidence with the collision event. Such events generate a large number of products, and hence, are not easily understood through chemical intuition. Our simulations show distinct differences between the AnK/AcA7K and KAn/AcKA7 series of peptides, with the former being more reactive, and the latter more selective. Backbone rearrangements and sidechain fragmentation are also seen.



中文翻译:

表面诱导解离过程中的快速片段化:检查肽的大小和结构

我们介绍了表面诱导解离的质子化形式的A n K,KA n(n = 1、3和5),AcA 7 K和AcKA 7与氟化自组装单分子层的碰撞的直接动力学模拟结果表面。我们专注于阐明与碰撞事件同时发生的快速碎片事件。这样的事件产生大量的产物,因此,通过化学直觉不容易理解。我们的模拟显示了A n K / AcA 7 K和KA n / AcKA 7之间的明显差异系列肽,前者更具反应性,而后者更具选择性。还可以看到骨干重排和侧链断裂。

更新日期:2020-07-02
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