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An integrated biophysical approach to discovering mechanisms of NDM-1 inhibition for several thiol-containing drugs.
JBIC Journal of Biological Inorganic Chemistry ( IF 3 ) Pub Date : 2020-06-04 , DOI: 10.1007/s00775-020-01794-z
Sarah Fullington 1 , Zishuo Cheng 1 , Caitlyn Thomas 1 , Callie Miller 1 , Kundi Yang 1 , Lin-Cheng Ju 1 , Alexander Bergstrom 1 , Ben A Shurina 1 , Stacey Lowery Bretz 1 , Richard C Page 1 , David L Tierney 1 , Michael W Crowder 1
Affiliation  

Due to the rapid proliferation of antibiotic-resistant pathogenic bacteria, known as carbapenem-resistant enterobacteriaceae, the efficacy of β-lactam antibiotics is threatened. β-lactam antibiotics constitute over 50% of the available antibiotic arsenal. Recent efforts have been focused on developing inhibitors to these enzymes. In an effort to understand the mechanism of inhibition(s) of four FDA-approved thiol-containing drugs that were previously reported to be inhibitors of New Delhi metallo-β-lactamase (NDM-1), various biochemical and spectroscopic techniques were used. Isothermal titration calorimetry demonstrated the binding affinity to NDM-1 corresponds to the reported IC50 values of the inhibitors. Equilibrium dialyses and metal analyses demonstrated that all of these inhibitors formed ternary complexes with ZnZn-NDM-1. Spectroscopic studies on CoCo-NDM-1 revealed two distinct binding modes for the thiol-containing compounds. These findings validate the need to further investigate the mechanism of inhibition of MBL inhibitors. Further research to identify inhibition capabilities beyond reported IC50 values is necessary for understanding the binding modes of these identified compounds and to provide the necessary foundation for developing clinically relevant MBL inhibitors.

中文翻译:

发现几种含硫醇药物的 NDM-1 抑制机制的综合生物物理方法。

由于耐碳青霉烯肠杆菌科细菌耐药病原菌的快速增殖,β-内酰胺类抗生素的疗效受到威胁。β-内酰胺类抗生素占可用抗生素库的 50% 以上。最近的努力集中在开发这些酶的抑制剂上。为了了解四种 FDA 批准的含硫醇药物的抑制机制,这些药物以前被报道为新德里金属-β-内酰胺酶 (NDM-1) 的抑制剂,使用了各种生化和光谱技术。等温滴定量热法证明对 NDM-1 的结合亲和力对应于报告的 IC 50抑制剂的值。平衡透析和金属分析表明,所有这些抑制剂都与 ZnZn-NDM-1 形成三元复合物。CoCo-NDM-1 的光谱研究揭示了含硫醇化合物的两种不同的结合模式。这些发现证实了进一步研究 MBL 抑制剂抑制机制的必要性。进一步研究以确定超出报告的 IC 50值的抑制能力对于理解这些已鉴定化合物的结合模式是必要的,并为开发临床相关的 MBL 抑制剂提供必要的基础。
更新日期:2020-06-04
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