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Viral-Induced Alternative Splicing of Host Genes Promotes Influenza Replication
bioRxiv - Molecular Biology Pub Date : 2020-05-30 , DOI: 10.1101/2020.05.28.122044
Matthew G Thompson , Mark Dittmar , Michael J Mallory , Prasanna Bhat , Max B. Ferretti , Beatriz MA Fontoura , Sara Cherry , Kristen W. Lynch

Viral infection induces the expression of numerous host genes that impact the outcome of infection. Here we show that infection of human lung epithelial cells with Influenza A virus (IAV) also induces a broad program of alternative splicing of host genes. While these splicing-regulated genes are not enriched for canonical regulators of viral infection, we find that many of these genes do impact replication of IAV. Moreover, specific inhibition of the IAV-induced splicing in several cases also attenuates viral infection. We further show that approximately a quarter of the IAV-induced splicing events are regulated by hnRNP K, a host protein that required for efficient splicing of the IAV M transcript in nuclear speckles. Notably, we find that hnRNP K accumulates in nuclear speckles upon IAV infection, which is likely to alter the accessibility of hnRNP K for host transcripts thereby leading to a program of host splicing changes that promote IAV replication.

中文翻译:

病毒诱导的宿主基因的选择性剪接促进流感复制。

病毒感染会诱导许多宿主基因的表达,从而影响感染的结果。在这里,我们显示,用A型流感病毒(IAV)感染人肺上皮细胞也会诱导宿主基因的选择性剪接的广泛程序。虽然这些剪接调节的基因没有丰富病毒感染的规范性调节剂,但我们发现许多这些基因确实影响了IAV的复制。而且,在几种情况下,对IAV诱导的剪接的特异性抑制也减弱了病毒感染。我们进一步显示,大约有四分之一的IAV诱导的剪接事件受hnRNP K调控,hnRNP K是在核斑点中有效剪接IAV M转录本所需的宿主蛋白。值得注意的是,我们发现IAR感染后hnRNP K累积在核斑中,
更新日期:2020-05-30
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