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LASCA-imaging of gene-based speckles: application to detection of the gene polymorphism in a bacterial model
Laser Physics Letters ( IF 1.7 ) Pub Date : 2020-05-27 , DOI: 10.1088/1612-202x/ab8b66
Onega Ulianova 1 , Alexander Ulyanov 2 , Sergey Zaytsev 3 , Yuriy Saltykov 3 , Sergey Ulyanov 1, 3 , Valentina Feodorova 3
Affiliation  

A current trend in modern bioinformatics is representation of nucleotide sequences in the form of gene-based (GB) speckles. In this letter GB-speckles have been processed using the s-LASCA (laser speckle contrast analysis) technique. Statistical properties of s-LASCA images of GB-speckles have been analyzed. It is shown that application of the s-LASCA technique allows us to essentially increase the the sensitivity of detection of a single nucleotide polymorphism using GB-speckles.

中文翻译:

基于基因斑点的LASCA成像:在细菌模型中检测基因多态性的应用

现代生物信息学的当前趋势是以核苷酸(GB)斑点形式表示核苷酸序列。在这封信中,已使用s-LASCA(激光斑点对比分析)技术处理了GB斑点。分析了GB斑点的s-LASCA图像的统计特性。结果表明,s-LASCA技术的应用使我们从本质上提高了使用GB斑点检测单核苷酸多态性的灵敏度。
更新日期:2020-05-27
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