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Resonance assignments and secondary structure prediction of secretory protein Rv0603 from Mycobacterium tuberculosis H37Rv.
Biomolecular NMR Assignments ( IF 0.9 ) Pub Date : 2020-05-20 , DOI: 10.1007/s12104-020-09948-5
Sarita Tripathi 1, 2 , Rahul Yadav 1 , Anupam Jain 1 , Surya V S R K Pulavarti 1 , Prem Prakash Pathak 1 , Ajaya Kumar Behera 2 , Ashish Arora 1
Affiliation  

We report the NMR resonance assignments of N-terminal signal sequence deleted secretory protein Rv0603 (∆1–28−Rv0603) from Mycobacterium tuberculosis H37Rv. ∆1–28−Rv0603 displayed good peak yield and signal dispersion in 2D [15N-1H] HSQC spectrum, which prompted us to proceed for resonance assignments on this construct. Standard triple-resonance experiments for resonance assignments were recorded on [U-15N]-∆Rv0603 and [U-15N, 13C]-∆Rv0603 samples. We obtained 97% of backbone 1HN, 98% of 13Cα, 98% of 1Hα, 96% of 13C´, 100% of 13Cβ, 100% of 1Hβ and 98% of side-chain 1H chemical shifts. This protein does not show any sequence similarity to any other protein of known structure. Determination of its solution structure would facilitate understanding of its biological function.

中文翻译:

结核分枝杆菌 H37Rv 分泌蛋白 Rv0603 的共振分配和二级结构预测。

我们报告了来自结核分枝杆菌H37Rv的 N 端信号序列缺失的分泌蛋白 Rv0603 (Δ 1–28 -Rv0603)的 NMR 共振分配。∆ 1–28 -Rv0603 在 2D [ 15 N- 1 H] HSQC 光谱中显示出良好的峰产量和信号色散,这促使我们继续对该构造进行共振分配。在 [ U - 15 N]-ΔRv0603 和 [ U - 15 N, 13 C]-ΔRv0603 样品上记录了用于共振分配的标准三重共振实验。我们获得了 97% 的主链1 H N,98% 的13 Cα、98% 的1 H α、96% 的13 C´、100% 的13 C β、100% 的1 H β和 98% 的侧链1 H 化学位移。该蛋白质与已知结构的任何其他蛋白质没有任何序列相似性。确定其溶液结构将有助于了解其生物学功能。
更新日期:2020-05-20
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