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Effect of linker length on photo-cross-linking position mediated by click chemistry via [2 + 2]photocycloaddition.
Photochemical & Photobiological Sciences ( IF 3.1 ) Pub Date : 2020-05-19 , DOI: 10.1039/d0pp00098a
Kenzo Fujimoto 1 , Kenta Ishida 1 , Li Xue 1 , Shigetaka Nakamura 1
Affiliation  

Ultrafast reversible DNA/RNA photo-cross-linking is a powerful tool for regulating the target strand in living cells. In particular, 3-cyanovinylcarbazole (CNVK) and 3-cyanovinylcarbazole modified by D-threoninol (CNVD) can photo-cross-link to pyrimidine bases within a few seconds of photoirradiation. However, these photo-cross-linkers can only cross-link to the counter base if it is adjacent to the 5′-side (−1 position). In this study, we synthesized novel photo-cross-linkers with varying linker lengths capable of photo-cross-linking with pyrimidine bases at locations other than the −1 position via click chemistry. The photo-cross-linking site was dependent on linker length.

中文翻译:

接头长度对通过点击化学经由[2 + 2]光环加成反应介导的光交联位置的影响。

超快速可逆DNA / RNA光交联是调节活细胞中靶链的强大工具。特别地,通过D-苏氨酸(CNV D)修饰的3-氰基乙烯基咔唑(CNV K)和3-氰基乙烯基咔唑可以在光辐照的几秒钟内光交联到嘧啶碱基上。但是,这些光交联剂仅在与5'侧(-1位置)相邻时才可以与对接基交联。在这项研究中,我们合成了具有不同接头长度的新型光交联剂,这些光交联剂能够通过点击化学与除-1位置以外的嘧啶碱基进行光交联。光交联位点取决于接头长度。
更新日期:2020-05-19
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