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Flanking Regions Determine the Structure of the Poly-Glutamine in Huntingtin through Mechanisms Common among Glutamine-Rich Human Proteins.
Structure ( IF 5.7 ) Pub Date : 2020-05-12 , DOI: 10.1016/j.str.2020.04.008
Annika Urbanek 1 , Matija Popovic 1 , Anna Morató 1 , Alejandro Estaña 2 , Carlos A Elena-Real 1 , Pablo Mier 3 , Aurélie Fournet 1 , Frédéric Allemand 1 , Stephane Delbecq 4 , Miguel A Andrade-Navarro 3 , Juan Cortés 5 , Nathalie Sibille 1 , Pau Bernadó 1
Affiliation  

The causative agent of Huntington's disease, the poly-Q homo-repeat in the N-terminal region of huntingtin (httex1), is flanked by a 17-residue-long fragment (N17) and a proline-rich region (PRR), which promote and inhibit the aggregation propensity of the protein, respectively, by poorly understood mechanisms. Based on experimental data obtained from site-specifically labeled NMR samples, we derived an ensemble model of httex1 that identified both flanking regions as opposing poly-Q secondary structure promoters. While N17 triggers helicity through a promiscuous hydrogen bond network involving the side chains of the first glutamines in the poly-Q tract, the PRR promotes extended conformations in neighboring glutamines. Furthermore, a bioinformatics analysis of the human proteome showed that these structural traits are present in many human glutamine-rich proteins and that they are more prevalent in proteins with longer poly-Q tracts. Taken together, these observations provide the structural bases to understand previous biophysical and functional data on httex1.



中文翻译:

侧翼区域通过富含谷氨酰胺的人类蛋白质之间的共同机制来确定亨廷顿蛋白中的聚谷氨酰胺的结构。

亨廷顿氏病的病原体是亨廷顿蛋白(httex1)N端区域的poly-Q同源重复序列,两侧是一个17个残基长的片段(N17)和一个富含脯氨酸的区域(PRR),尚不清楚的机制分别促进和抑制蛋白质的聚集倾向。基于从现场特定标记的NMR样品获得的实验数据,我们得出了httex1的整体模型,该模型将两个侧翼区域都识别为相对的poly-Q二级结构启动子。N17通过涉及Q链中第一个谷氨酰胺侧链的混杂氢键网络触发螺旋性时,PRR促进了相邻谷氨酰胺中的扩展构象。此外,对人类蛋白质组进行的生物信息学分析表明,这些结构特征存在于许多富含谷氨酰胺的人类蛋白质中,并且在具有较长多Q链的蛋白质中更普遍。综上所述,这些观察结果为理解httex1以前的生物物理和功能数据提供了结构基础。

更新日期:2020-07-07
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