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Grayscale representation of infrared microscopy images by extended multiplicative signal correction for registration with histological images.
Journal of Biophotonics ( IF 2.8 ) Pub Date : 2020-05-11 , DOI: 10.1002/jbio.201960223
Stanislau Trukhan 1, 2 , Valeria Tafintseva 1 , Kristin Tøndel 1 , Frederik Großerueschkamp 3, 4 , Axel Mosig 3, 4 , Vassili Kovalev 2 , Klaus Gerwert 3, 4 , Achim Kohler 1
Affiliation  

Fourier‐transform infrared (FTIR) microspectroscopy is rounding the corner to become a label‐free routine method for cancer diagnosis. In order to build infrared‐spectral based classifiers, infrared images need to be registered with Hematoxylin and Eosin (H&E) stained histological images. While FTIR images have a deep spectral domain with thousands of channels carrying chemical and scatter information, the H&E images have only three color channels for each pixel and carry mainly morphological information. Therefore, image representations of infrared images are needed that match the morphological information in H&E images. In this paper, we propose a novel approach for representation of FTIR images based on extended multiplicative signal correction highlighting morphological features that showed to correlate well with morphological information in H&E images. Based on the obtained representations, we developed a strategy for global‐to‐local image registration for FTIR images and H&E stained histological images of parallel tissue sections.image

中文翻译:

红外显微图像的灰度表示,通过扩展的乘性信号校正可与组织学图像对齐。

傅里叶变换红外(FTIR)显微光谱技术即将成为一种无标签的癌症诊断常规方法。为了建立基于红外光谱的分类器,需要将红外图像与苏木精和曙红(H&E)染色的组织学图像进行配准。虽然FTIR图像具有很深的光谱域,具有成千上万个承载化学和散射信息的通道,但是H&E图像每个像素只有三个颜色通道,并且主要承载形态信息。因此,需要与H&E图像中的形态信息相匹配的红外图像的图像表示。在本文中,我们提出了一种新的方法来表示FTIR图像,该方法基于扩展的倍增信号校正突出显示了形态特征,该特征与H&E图像中的形态信息很好地相关。基于获得的表示,我们开发了针对平行组织切片的FTIR图像和H&E染色的组织学图像进行全局到局部图像配准的策略。图片
更新日期:2020-05-11
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