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Screening of a large PAX6 cohort identified many novel variants and emphasises the importance of the paired and homeobox domains.
European Journal of Medical Genetics ( IF 1.9 ) Pub Date : 2020-04-30 , DOI: 10.1016/j.ejmg.2020.103940
Esther Cross 1 , Philippa J Duncan-Flavell 1 , Rachel J Howarth 1 , Richard O Crooks 1 , N Simon Thomas 2 , David J Bunyan 2
Affiliation  

Pathogenic variants within PAX6 are most often associated with aniridia, but have been linked with other phenotypes such as nystagmus, cataracts and foveal hypoplasia. Data are presented from a large cohort of 434 probands referred for PAX6 diagnostic testing. This analysis identified a wide range of pathogenic variants (n = 145) in 254 probands (including 61 novel variants). Excluding missense variants predicted to affect splicing, all 29 of the remaining missense variants were located within the paired (n = 27) or homeobox (n = 2) domains of the PAX6 protein, providing further evidence that these domains are critical to normal PAX6 function. Genotype-phenotype evidence suggests that while aniridia is associated with most variant types, a much broader clinical spectrum is seen in patients harbouring a missense variant, or a frameshift or run-on variant that results in an elongated or extended PAX6 protein.



中文翻译:

大型PAX6队列的筛选确定了许多新颖的变体,并强调了配对和同源框结构域的重要性。

PAX6内的致病变异最常与虹膜异色症相关,但已与其他表型(如眼球震颤,白内障和中央凹发育不全)联系在一起。数据来自针对PAX6的434个先证者的大量队列诊断测试。这项分析确定了254个先证者(包括61个新变异)中的多种致病变异(n = 145)。除预计会影响剪接的错义变体外,其余所有29个错义变体均位于PAX6蛋白的配对(n = 27)或同源框(n = 2)域内,提供了进一步的证据表明这些域对正常的PAX6功能至关重要。基因型-表型的证据表明,尽管无虹膜症与大多数变异类型有关,但在携带错义变异,移码或连续变异的患者中,PAX6蛋白变长或变长的患者的临床范围更广。

更新日期:2020-04-30
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