当前位置: X-MOL 学术J. Appl. Genet. › 论文详情
Our official English website, www.x-mol.net, welcomes your feedback! (Note: you will need to create a separate account there.)
An integrative bioinformatics analysis identified miR-375 as a candidate key regulator of malignant breast cancer.
Journal of Applied Genetics ( IF 2.4 ) Pub Date : 2019-08-01 , DOI: 10.1007/s13353-019-00507-w
Jiaxuan Liu 1 , Ping Wang 1 , Ping Zhang 2 , Xinyu Zhang 1 , Hang Du 1 , Qiang Liu 3 , Bo Huang 2 , Caiyun Qian 4 , Shuhua Zhang 5 , Weifeng Zhu 4 , Xiaohong Yang 4 , Yingqun Xiao 2 , Zhuoqi Liu 4 , Daya Luo 4, 6
Affiliation  

MicroRNAs (miRNAs) are key regulators that play important biological roles in carcinogenesis and are promising biomarkers for cancer diagnosis and therapy. hsa-miR-375-3p (miR-375) has been suggested to serve as a tumor suppressor or oncogene in various tumor types; however, its specific expression and potential regulatory role in malignant breast cancer remain unclear. In this study, the results from noncoding RNA microarray analysis indicated that the miR-375 expression level is significantly decreased in malignant basal-like breast cancer compared with luminal-like breast cancer. A total of 1895 co-downregulated and 1645 co-upregulated genes were identified in miR-375 mimic-transfected basal-like breast cancer cell lines. Predicted miR-375 targets were obtained from the online databases TargetScan and DIANA-microT-CDS. Combined KEGG enrichment analysis for coregulated genes and predicted miR-375 targets provided information and revealed differences in potential dynamic signaling pathways regulated by miR-375 and also indicated specific regulatory pathways, such as RNA transport and processing, in basal-like breast cancer. Additionally, gene expression microarray analysis accompanied by UALCAN analysis was performed to screen upregulated genes in the basal-like subtype. Four potential key genes, including LDHB, CPNE8, QKI, and EIF5A2, were identified as candidate target genes of miR-375. Therefore, the present study demonstrated that miR-375 may be a potential key regulator and provide a promising direction for diagnostic and therapeutic developments for malignant breast cancer.

中文翻译:

综合的生物信息学分析确定miR-375是恶性乳腺癌的候选关键调控因子。

微小RNA(miRNA)是关键调节剂,在致癌作用中起着重要的生物学作用,并且是癌症诊断和治疗的有前途的生物标记。已建议将hsa-miR-375-3p(miR-375)用作各种肿瘤类型的抑癌剂或癌基因。然而,其在恶性乳腺癌中的特异性表达和潜在调控作用仍不清楚。在这项研究中,非编码RNA微阵列分析的结果表明,与管腔样乳腺癌相比,miR-375表达水平在恶性基底样乳腺癌中显着降低。在miR-375模拟转染的基底样乳腺癌细胞系中共鉴定到1895个共同下调的基因和1645个共同上调的基因。预测的miR-375靶标是从在线数据库TargetScan和DIANA-microT-CDS获得的。结合KEGG富集分析的基因和预测的miR-375靶标提供了信息,并揭示了miR-375调控的潜在动态信号传导途径的差异,还表明了基底样乳腺癌中特定的调控途径,例如RNA转运和加工。此外,进行了基因表达微阵列分析和UALCAN分析,以筛选基底样亚型中上调的基因。四个潜在的关键基因,包括 进行基因表达微阵列分析和UALCAN分析,以筛选基底样亚型中上调的基因。四个潜在的关键基因,包括 进行基因表达微阵列分析和UALCAN分析,以筛选基底样亚型中上调的基因。四个潜在的关键基因,包括LDHBCPNE8QKIEIF5A2被确定为miR-375的候选靶基因。因此,本研究证明miR-375可能是潜在的关键调节剂,并为恶性乳腺癌的诊断和治疗发展提供了有希望的方向。
更新日期:2019-08-01
down
wechat
bug