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Real-time reverse transcription loop-mediated isothermal amplification for rapid and simple quantification of WT1 mRNA.
Clinical Biochemistry ( IF 2.8 ) Pub Date : 2009-03-20 , DOI: 10.1016/j.clinbiochem.2009.01.013
Soji Morishita 1 , Hidenori Tani , Shinya Kurata , Kazunori Nakamura , Satoshi Tsuneda , Yuji Sekiguchi , Naohiro Noda
Affiliation  

OBJECTIVES This study developed a novel MRD monitoring method targeting Wilms' tumor gene (WT1) mRNA using reverse transcription loop-mediated isothermal amplification (RT-LAMP). DESIGN AND METHODS A primer set for the assay was designed on the basis of the sequences between the 17AA and KTS regions of WT1mRNA. WT1 mRNA was quantified by real-time RT-LAMP and the accuracy of RT-LAMP was compared with that of real-time RT-PCR. RESULTS The standard curve was expressed as a linear relationship between the log copy numbers of WT1 mRNA ranging from 6.8 x 10 to 6.8 x 10(9) copies and the threshold time with a correlation coefficient of R(2) > 0.994. The measured values obtained by RT-LAMP strongly correlated with those obtained by real-time RT-PCR. CONCLUSION RT-LAMP can be used to determine WT1 mRNA expression levels. This assay will contribute to a more specific, simple, and rapid MRD monitoring than conventional assays.

中文翻译:

实时逆转录环介导的等温扩增,用于快速,简单地定量WT1 mRNA。

目的本研究开发了一种新的MRD监测方法,该方法使用逆转录环介导的等温扩增(RT-LAMP)靶向Wilms的肿瘤基因(WT1)mRNA。设计与方法根据WT1mRNA的17AA和KTS区之间的序列设计了用于该测定的引物组。通过实时RT-LAMP对WT1 mRNA进行定量,并将RT-LAMP的准确性与实时RT-PCR的准确性进行比较。结果标准曲线以WT1 mRNA的对数拷贝数从6.8 x 10到6.8 x 10(9)拷贝与阈值时间之间的线性关系表示,相关系数R(2)> 0.994。通过RT-LAMP获得的测量值与通过实时RT-PCR获得的测量值高度相关。结论RT-LAMP可用于确定WT1 mRNA表达水平。
更新日期:2009-02-04
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