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Creating a zero amylose barley with high soluble sugar content by genome editing Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-24 Yun Li, Yanyan Jiang, Dong Cao, Bin Dang, Xijuan Yang, Shiting Fan, Yuhu shen, Genying Li, Baolong Liu
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Developmental pleiotropy of SDP1 from seedling to mature stages in B. napus Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-20 Baolong Tao, Yina Ma, Liqin Wang, Chao He, Junlin Chen, Xiaoyu Ge, Lun Zhao, Jing Wen, Bin Yi, Jinxing Tu, Tingdong Fu, Jinxiong Shen
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Transcriptomic analysis of hub genes regulating albinism in light- and temperature-sensitive albino tea cultivars ‘Zhonghuang 1’ and ‘Zhonghuang 2’ Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-17 Lu Wang, Taimei Di, Nana Li, Jing Peng, Yedie Wu, Mingming He, Xinyuan Hao, Jianyan Huang, Changqing Ding, Yajun Yang, Xinchao Wang
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Tandem transcription factors PpNAC1 and PpNAC5 synergistically activate the transcription of the PpPGF to regulate peach softening during fruit ripening Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-17 Langlang Zhang, Xiaofei Wang, Kang Dong, Bin Tan, Xianbo Zheng, Xia Ye, Wei Wang, Jun Cheng, Jiancan Feng
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Frontiers in plant RNA research in ICAR2023: from lab to innovative agriculture Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-17 Ming-Jung Liu, Jhen-Cheng Fang, Ya Ma, Geeng Loo Chong, Chun-Kai Huang, Ami Takeuchi, Natsu Takayanagi, Misato Ohtani
The recent growth in global warming, soil contamination, and climate instability have widely disturbed ecosystems, and will have a significant negative impact on the growth of plants that produce grains, fruits and woody biomass. To conquer this difficult situation, we need to understand the molecular bias of plant environmental responses and promote development of new technologies for sustainable
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GATA transcription factor in common bean: A comprehensive genome-wide functional characterization, identification, and abiotic stress response evaluation Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-17 Mohamed Farah Abdulla, Karam Mostafa, Abdullah Aydin, Musa Kavas, Emre Aksoy
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The R2R3-MYB transcription factor ZeMYB32 negatively regulates anthocyanin biosynthesis in Zinnia elegans Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-17 Lingli Jiang, Jiahong Chen, Jieyu Qian, Menghan Xu, Hongsheng Qing, Hefeng Cheng, Jianxin Fu, Chao Zhang
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Genome-wide view and characterization of natural antisense transcripts in Cannabis Sativa L Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-17 Chang Zhang, Mei Jiang, Jingting Liu, Bin Wu, Chang Liu
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Mechanism of benzoxazinoids affecting the growth and development of Fusarium oxysporum f. sp. fabae Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-17 Zixuan Cen, Bijie Hu, Siyin Yang, Guanglei Ma, Yiran Zheng, Yan Dong
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Oschib1 gene encoding a GH18 chitinase confers resistance against sheath blight disease of rice caused by Rhizoctonia solani AG1-IA Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-16 Naresh Babu Prathi, Chagamreddy Venkata Durga Rani, Vellaisamy Prakasam, Yeshala Chandra Mohan, Gandikota Mahendranath, G. K. Sri Vidya, C. N. Neeraja, Raman Meenakshi Sundaram, Satendra K. Mangrauthia
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Variations and reduction of plastome are associated with the evolution of parasitism in Convolvulaceae Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-15 Li-Qiong Chen, Xin Li, Xin Yao, De-Zhu Li, Craig Barrett, Claude W. dePamphilis, Wen-Bin Yu
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Bacteria from the skin of amphibians promote growth of Arabidopsis thaliana and Solanum lycopersicum by modifying hormone-related transcriptome response Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-14 Yordan J. Romero-Contreras, Francisco González-Serrano, Elena Bello-López, Damien Formey, Wendy Aragón, Miguel Ángel Cevallos, Eria A. Rebollar, Mario Serrano
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Reactive oxygen species (ROS) modulate nitrogen signaling using temporal transcriptome analysis in foxtail millet Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-11 Hui-Xin Meng, Yu-Ze Wang, Xin-Li Yao, Xin-Ran Xie, Shuqi Dong, Xiangyang Yuan, Xiaorui Li, Lulu Gao, Guanghui Yang, Xiaoqian Chu, Jia-Gang Wang
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Insights into the cell-wall dynamics in grapevine berries during ripening and in response to biotic and abiotic stresses Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-11 Giulia Malacarne, Jorge Lagreze, Barbara Rojas San Martin, Mickael Malnoy, Marco Moretto, Claudio Moser, Lorenza Dalla Costa
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A long non-coding RNA functions as a competitive endogenous RNA to modulate TaNAC018 by acting as a decoy for tae-miR6206 Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-10 Wei-Bo Xu, Qian-Huan Guo, Peng Liu, Shuang Dai, Chang-Ai Wu, Guo-Dong Yang, Jin-Guang Huang, Shi-Zhong Zhang, Jian-Min Song, Cheng-Chao Zheng, Kang Yan
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Utilizing plasma-generated N2O5 gas from atmospheric air as a novel gaseous nitrogen source for plants Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-08 Taro Yamanashi, Shouki Takeshi, Shota Sasaki, Keisuke Takashima, Toshiro Kaneko, Yasuhiro Ishimaru, Nobuyuki Uozumi
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Genome-wide identification and in-silico expression analysis of CCO gene family in sunflower (Helianthus annnus) against abiotic stress Plant Mol. Biol. (IF 5.1) Pub Date : 2024-04-03 Adnan Sami, Muhammad Zeeshan Haider, Muhammad Shafiq, Saleh Sadiq, Farooq Ahmad
Carotenoid cleavage oxygenases (CCOs) enzymes play an important role in plant growth and development by producing a wide array of apocarotenoids and their derivatives. These compounds are vital for colouring flowers and fruits and synthesizing plant hormones such as abscisic acid and strigolactones. Despite their importance, the gene family responsible for CCO enzymes in sunflowers has not been identified
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Artificial intelligence models for validating and predicting the impact of chemical priming of hydrogen peroxide (H2O2) and light emitting diodes on in vitro grown industrial hemp (Cannabis sativa L.) Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-25 Muhammad Aasim, Buşra Yıldırım, Ahmet Say, Seyid Amjad Ali, Selim Aytaç, Muhammad Azhar Nadeem
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Overexpression of transcription factor FaMYB63 enhances salt tolerance by directly binding to the SOS1 promoter in Arabidopsis thaliana Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-21 Shuaishuai Wang, Rongyi Jiang, Jian Feng, Haodong Zou, Xiaohuan Han, Xingbin Xie, Guanghui Zheng, Congbing Fang, Jing Zhao
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Full-length transcriptome analysis of Ophioglossum vulgatum: effects of experimentally identified chloroplast gene clusters on expression and evolutionary patterns Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-21 Jing Hao, Yingyi Liang, Jingyao Ping, Ting Wang, Yingjuan Su
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Coordination between two cis-elements of WRKY33, bound by the same transcription factor, confers humid adaption in Arabidopsis thaliana Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-19 Bao Liu, Yudan Zheng, Shangling Lou, Meng Liu, Weiwei Wang, Xiaoqin Feng, Han Zhang, Yan Song, Huanhuan Liu
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Integrative omics studies revealed synergistic link between sucrose metabolic isogenes and carbohydrates in poplar roots infected by Fusarium wilt Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-19 Xianglei Xu, Haikun Wei, Kejun Yao, Hao Wu, Tingting Huang, Mei Han, Tao Su, Fuliang Cao
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The dicot homolog of maize PPR103 carries a C-terminal DYW domain and may have a role in C-to-U editing of some chloroplast RNA transcripts Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-15 Tyra N. McCray, Mohammad F. Azim, Tessa M. Burch-Smith
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Arginine inhibits the arginine biosynthesis rate-limiting enzyme and leads to the accumulation of intracellular aspartate in Synechocystis sp. PCC 6803 Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-13 Noriaki Katayama, Takashi Osanai
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Functional annotation of proteins in Catharanthus roseus shoot cultures under biogenic zinc nanotreatment Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-08 Shaghufta Perveen, Matthew P. Padula, Naila Safdar, Sidra Abbas
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Moving forward to understand the alteration of physiological mechanism by seed priming with different halo-agents under salt stress Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-08 Alivia Paul, Subhankar Mondal, Koushik Chakraborty, Asok K. Biswas
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Methylomes as key features for predicting recombination in some plant species Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-08 Mauricio Peñuela, Jorge Finke, Camilo Rocha
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Characterization of CYP82 genes involved in the biosynthesis of structurally diverse benzylisoquinoline alkaloids in Corydalis yanhusuo Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-07 Xiuyu Liu, Ying Ma, Junling Bu, Conglong Lian, Rui Ma, Qishuang Li, Xiang Jiao, Zhimin Hu, Yun Chen, Suiqing Chen, Juan Guo, Luqi Huang
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A transient in planta editing assay identifies specific binding of the splicing regulator PTB as a prerequisite for cassette exon inclusion Plant Mol. Biol. (IF 5.1) Pub Date : 2024-03-05 Jorinde Loeser, Julia Bauer, Kim Janßen, Kevin Rockenbach, Andreas Wachter
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IPD3, a master regulator of arbuscular mycorrhizal symbiosis, affects genes for immunity and metabolism of non-host Arabidopsis when restored long after its evolutionary loss Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-18 Eli D. Hornstein, Melodi Charles, Megan Franklin, Brianne Edwards, Simina Vintila, Manuel Kleiner, Heike Sederoff
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Genome-wide identification, stress- and hormone-responsive expression characteristics, and regulatory pattern analysis of Scutellaria baicalensis SbSPLs Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-16 Jia-wen Wu, Zi-yi Zhao, Ren-chuan Hu, Yun-feng Huang
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Delineation of genes for a major QTL governing heat stress tolerance in chickpea Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-16 Jitendra K. Mohanty, Virevol Thakro, Antima Yadav, Harsh Nayyar, Girish P. Dixit, Pinky Agarwal, Swarup K. Parida, Uday Chand Jha
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Optimized transgene expression in the red alga Porphyridium purpureum and efficient recombinant protein secretion into the culture medium Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-14 Alexander Hammel, Juliane Neupert, Ralph Bock
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Fluoride transport in Arabidopsis thaliana plants is impaired in Fluoride EXporter (FEX) mutants Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-11 S. Lori Tausta, Kathryn Fontaine, Ansel T. Hillmer, Scott A. Strobel
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Modulation of the wheat transcriptome by TaZFP13D under well-watered and drought conditions Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-09 William Bouard, François Ouellet, Mario Houde
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Genome-wide identification of GATA transcription factor family and the effect of different light quality on the accumulation of terpenoid indole alkaloids in Uncaria rhynchophylla Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-08
Abstract Uncaria rhynchophylla is an evergreen vine plant, belonging to the Rubiaceae family, that is rich in terpenoid indole alkaloids (TIAs) that have therapeutic effects on hypertension and Alzheimer’s disease. GATA transcription factors (TF) are a class of transcription regulators that participate in the light response regulation, chlorophyll synthesis, and metabolism, with the capability to bind
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Arabidopsis thaliana ubiquitin-associated protein 2 (AtUAP2) functions as an E4 ubiquitin factor and negatively modulates dehydration stress response Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-07 Cho-Rong Park, Ji-Hee Min, Ying Gong, Hyunkyu Sang, Kyeong-Hwan Lee, Cheol Soo Kim
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PpSCARECROW1 (PpSCR1) regulates leaf blade and mid-vein development in Physcomitrium patens Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-07 Boominathan Mohanasundaram, Shirsa Palit, Amey J. Bhide, Madhusmita Pala, Kanishka Rajoria, Payal Girigosavi, Anjan K. Banerjee
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Overexpression of vacuolar transporters OsVIT1 and OsVIT2 reduces cadmium accumulation in rice Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-07 Jin-Song Luo, Jing Tang, Yiqi He, Dong Liu, Yilin Yang, Zhenhua Zhang
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Iron reprogrammes the root system architecture by regulating OsWRKY71 in arsenic-stressed rice (Oryza sativa L.) Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-07 Zainab Mirza, Meetu Gupta
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Integration of transcriptome and metabolome reveals the accumulation of related metabolites and gene regulation networks during quinoa seed development Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-06 Qianchao Wang, Jirong Shi, Junna Liu, Ping Zhang, Li Li, Heng Xie, Hanxue Li, Hongxin Wang, Chenghong Liu, Peng Qin
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Characterization and genetic differences analysis in adventitious roots development of 38 Populus germplasm resources Plant Mol. Biol. (IF 5.1) Pub Date : 2024-02-05 Min Zhang, Xinglu Zhou, Xiaodong Xiang, Hantian Wei, Lei Zhang, Jianjun Hu
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Bread wheat satellitome: a complex scenario in a huge genome Plant Mol. Biol. (IF 5.1) Pub Date : 2024-01-30 Ana Gálvez-Galván, Manuel A. Garrido-Ramos, Pilar Prieto
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Plant U-box E3 ligases PUB20 and PUB21 negatively regulate pattern-triggered immunity in Arabidopsis Plant Mol. Biol. (IF 5.1) Pub Date : 2024-01-24 So Young Yi, Vladimir Nekrasov, Kazuya Ichimura, Si-Yong Kang, Ken Shirasu
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RNS2 is required for the biogenesis of a wounding responsive 16 nts tsRNA in Arabidopsis thaliana Plant Mol. Biol. (IF 5.1) Pub Date : 2024-01-24 Yan Chen, Xiaobin Liu, Weiqiang Chen, Lei Zhu
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Identification and characterization of GLYCEROLIPASE A1 for wound-triggered JA biosynthesis in Nicotiana benthamiana leaves Plant Mol. Biol. (IF 5.1) Pub Date : 2024-01-16 Rebekah E. Holtsclaw, Sakil Mahmud, Abraham J. Koo
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Identification of vernalization-related genes and cold memory element (CME) required for vernalization response in radish (Raphanus sativus L.) Plant Mol. Biol. (IF 5.1) Pub Date : 2024-01-16 Sang Woo Lee, Adji Baskoro Dwi Nugroho, Minkyu Park, Heewon Moon, Jun Kim, Dong-Hwan Kim
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The enzymatic properties of Arabidopsis thaliana DNA polymerase λ suggest a role in base excision repair Plant Mol. Biol. (IF 5.1) Pub Date : 2024-01-13 T. Morales-Ruiz, C. Beltrán-Melero, D. Ortega-Paredes, J. A. Luna-Morillo, M. I. Martínez-Macías, T. Roldán-Arjona, R. R. Ariza, D. Córdoba-Cañero
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The N-terminal α2 helix element is critical for the activity of the rice transcription factor MYC2 Plant Mol. Biol. (IF 5.1) Pub Date : 2024-01-08 Hongyue Zu, Gaochen Jin, Yaze Kong, Zhaoyang Li, Yonggen Lou, Ran Li
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Rice PIFs: Critical regulators in rice development and stress response Plant Mol. Biol. (IF 5.1) Pub Date : 2024-01-04 Yixuan Sun, Qian Li, Meidi Wu, Qingwen Wang, Dongping Zhang, Yong Gao
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Cell wall anisotropy plays a key role in Zea mays stomatal complex movement: the possible role of the cell wall matrix Plant Mol. Biol. (IF 5.1) Pub Date : 2023-12-18 K. Gkolemis, E. Giannoutsou, I-D. S. Adamakis, B. Galatis, P. Apostolakos
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Lyso-phosphatidylethanolamine triggers immunity against necrotrophs by promoting JA-signaling and ROS-homeostasis Plant Mol. Biol. (IF 5.1) Pub Date : 2023-12-12 Ronny Vӧlz, Ki-Tae Kim, Mazen Alazem, William Harris, Sungkee Hwang, Yong-Hwan Lee
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The interplay between cell wall integrity and cell cycle progression in plants Plant Mol. Biol. (IF 5.1) Pub Date : 2023-12-13 Nancy Soni, Laura Bacete
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The NtDEGP5 gene improves drought tolerance in tobacco (Nicotiana tabacum L.) by dampening plastid extracellular Ca2+ and flagellin signaling and thereby reducing ROS production Plant Mol. Biol. (IF 5.1) Pub Date : 2023-11-20 Gang Chen, Yanqi Shu, Zilin Jian, Lili Duan, Zejun Mo, Renxiang Liu
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Uncovering molecular mechanisms involved in microbial volatile compounds-induced stomatal closure in Arabidopsis thaliana Plant Mol. Biol. (IF 5.1) Pub Date : 2023-11-20 Tu-Trinh Thi Truong, Chi-Chou Chiu, Jing-Yu Chen, Pei-Yu Su, Tri-Phuong Nguyen, Ngoc-Nam Trinh, Tetsuro Mimura, Ruey-Hua Lee, Ching-Han Chang, Hao-Jen Huang
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Xylobiose treatment triggers a defense-related response and alters cell wall composition Plant Mol. Biol. (IF 5.1) Pub Date : 2023-11-22 Bhagwat Prasad Dewangan, Arunima Gupta, Rajan Kumar Sah, Shouvik Das, Sandeep Kumar, Saikat Bhattacharjee, Prashant Anupama-Mohan Pawar
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Conserved and non-conserved RNA–target modules in plants: lessons for a better understanding of Marchantia development Plant Mol. Biol. (IF 5.1) Pub Date : 2023-11-22 Halina Pietrykowska, Alisha Alisha, Bharti Aggarwal, Yuichiro Watanabe, Misato Ohtani, Artur Jarmolowski, Izabela Sierocka, Zofia Szweykowska-Kulinska
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The Capsicum terpenoid biosynthetic module is affected by spider-mite herbivory Plant Mol. Biol. (IF 5.1) Pub Date : 2023-11-23 Yuanyuan Zhang, Arman B. Kashkooli, Suze Blom, Tao Zhao, Harro J. Bouwmeester, Iris F. Kappers
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Genetic diversity, transcript heterogeneity and allele mining of TaSKP1-6B-4 gene variants across diverse genotypes under terminal heat stress and genome wide characterization of TaSKP1 gene family from bread wheat (Triticum aestivum L.) Plant Mol. Biol. (IF 5.1) Pub Date : 2023-11-20 Praful Jaiswal, Akshay Singh, Kriti Bajpai, Kabitha Tripathi, Anant Narayan Sahi, Sharmistha Barthakur
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GmWRKY17-mediated transcriptional regulation of GmDREB1D and GmABA2 controls drought tolerance in soybean Plant Mol. Biol. (IF 5.1) Pub Date : 2023-11-16 Yi Liu, Yueping Cao