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Exploring conformational preferences of alanine tetrapeptide by CCSD(T), MP2, and dispersion-corrected DFT methods
Chemical Physics Letters ( IF 2.8 ) Pub Date : 2018-05-04
Young Kee Kang, Hae Sook Park

The 129 local minima of the alanine tetrapeptide with relative energy < 10 kcal/mol were identified at the ωB97X-D/6-311++G(d,p) level of theory from initial structures generated by combining nine local minima of each residue. The CCSD(T), MP2, and dispersion-corrected DFT levels of theory with various basis sets were assessed for relative energies of the 24 representative conformations. The best performance was obtained at the double-hybrid DSD-PBEP86-D3BJ/def2-QZVP level of theory with RMSD = 0.12 kcal/mol against the CCSD(T)/CBS-limit energies. The ωB97X-D/def2-QZVP and CAM-B3LYP-D3BJ/def2-QZVP levels of theory can be an alternative level of theory with marginal deviations for conformational study of peptides.



中文翻译:

通过CCSD(T),MP2和色散校正DFT方法探索丙氨酸四肽的构象偏爱

相对能量<10丙氨酸四肽的129局部最小值千卡/摩尔在鉴定ω B97X-d从生成的初始结构理论/ 6-311 ++ G(d,p)水平通过组合每九个局部最小值残留物。针对24种代表性构象的相对能量,对CCSD(T),MP2和色散校正的DFT理论水平(具有各种基础集)进行了评估。在双混合DSD-PBEP86-D3BJ / def2-QZVP理论水平上,相对于CCSD(T)/ CBS极限能量,RMSD = 0.12 kcal / mol,可获得最佳性能。所述ω B97X-d / DEF2-QZVP和CAM-B3LYP-D3BJ /理论的DEF2-QZVP水平可以与肽的构象研究边际偏差理论的选择项层次。

更新日期:2018-05-04
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