样式: 排序: IF: - GO 导出 标记为已读
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Quantification of the dark fungal taxon Cryptomycota using qPCR Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-04-14 Katrin Stüer‐Patowsky, Osu Lilje, Christian Wurzbacher
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Utilization of lasso peptides for biodegradation of polycyclic aromatic hydrocarbons Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-04-11 Waltena Simpson, Robin L. Brigmon, Daniel Howard, Makaela Jackson, Alex Kugler, Victoria Brown
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Interplay of intracellular and trans-cellular DNA methylation in natural archaeal consortia Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-04-08 Oleg N. Reva, Violetta La Cono, Francesca Crisafi, Francesco Smedile, Manasi Mudaliyar, Debnath Ghosal, Laura Giuliano, Mart Krupovic, Michail M. Yakimov
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Nitrate and oxygen significantly changed the abundance rather than structure of sulphate‐reducing and sulphur‐oxidising bacteria in water retrieved from petroleum reservoirs Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-04-06 Huimei Tian, Peike Gao, Chen Qi, Guoqiang Li, Ting Ma
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Regulation of nitrogen transformation and microbial community by inoculation during livestock manure composting Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-04-04 Rui Cao, Yihao Huang, Ruyu Li, Ke Li, Zhuqing Ren, Jian Wu
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Genome‐resolved metagenomics identifies novel active microbes in biogeochemical cycling within methanol‐enriched soil Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-04-04 Michael C. Macey
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The influence of tree genus, phylogeny, and richness on the specificity, rarity, and diversity of ectomycorrhizal fungi Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-04-04 Leho Tedersoo, Rein Drenkhan, Kessy Abarenkov, Sten Anslan, Mohammad Bahram, Kriss Bitenieks, Franz Buegger, Daniyal Gohar, Niloufar Hagh‐Doust, Darta Klavina, Kristaps Makovskis, Austra Zusevica, Karin Pritsch, Allar Padari, Sergei Põlme, Saleh Rahimlou, Dainis Rungis, Vladimir Mikryukov
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Bacillus velezensisSQR9 promotes plant growth through colonization and rhizosphere–phyllosphere bacteria interaction Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-04-04 Zhao Yu, Dongsheng Wang, Bo Zhang, Hancheng Mao, Zhe Wang, Zhiguang Yan, Chengyuan Tao, Xuhui Deng, Qirong Shen, Rong Li
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Micromonas, a small pigmented flagellate, predominates the nanoflagellate and photosynthetic picoeukaryote communities in the northern South China Sea Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-03-28 Xin Guo, Mengwen Pang, Xinyi Zheng, Lingfeng Huang
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Phototrophic Fe(II) oxidation benefits from light/dark cycles Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-03-16 Verena Nikeleit, Linda Roth, Markus Maisch, Andreas Kappler, Casey Bryce
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Research progress of anaerobic ammonium oxidation (Anammox) process based on integrated fixed‐film activated sludge (IFAS) Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-03-06 Guang Li, Yunyong Yu, Xingyu Li, Hongsheng Jia, Xiaoning Ma, Prince Atta Opoku
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Bacterial symbionts of the precious coral Corallium rubrum are differentially distributed across colony‐specific compartments and differ among colormorphs Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-03-06 Jeroen A. J. M. van de Water, Denis Allemand, Christine Ferrier‐Pagès
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Functional analyses of bacterial genomes found in Symbiodiniaceae genome assemblies Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-03-06 Eiichi Shoguchi, Masanobu Kawachi, Chuya Shinzato, Girish Beedessee
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Construction of a versatile in vitro cultivation screening platform using human oral microbiota Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-03-01 Kengo Sasaki, Yasunobu Takeshima, Ayami Fujino, Junya Yamashita, Akira Kimoto, Daisuke Sasaki, Akihiko Kondo, Masaya Akashi, Ryo Okumura
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Profiling microbial communities in an extremely acidic environment influenced by a cold natural carbon dioxide spring: A study of the Mefite in Ansanto Valley, Southern Italy Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-02-26 Olga De Castro, Mariano Avino, Federica Carraturo, Emanuela Di Iorio, Donato Giovannelli, Michele Innangi, Bruno Menale, Nicolina Mormile, Jacopo Troisi, Marco Guida
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Detection of Klebsiella pneumoniae in healthy poultry: Insights and perspectives from culturing and metagenomics Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-02-23 Håkon Kaspersen, Anne Margrete Urdahl, Hanna Karin Ilag, Fiona Valerie Franklin‐Alming, Thomas H. A. Haverkamp, Marianne Sunde
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Distinct microbial communities in an ascidian–crustacean symbiosis Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-02-22 Brenna Hutchings, Susanna López‐Legentil, Lauren M. Stefaniak, Marie Nydam, Patrick M. Erwin
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Distribution of the N2-fixing cyanobacterium Candidatus Atelocyanobacterium thalassa in the Mexican Pacific upwelling system under two contrasting El Niño Southern Oscillation conditions Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-02-13 Cinthya Vieyra-Mexicano, Valeria Souza, Silvia Pajares
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Explorative characterization and taxonomy-aligned comparison of alterations in lipids and other biomolecules in Antarctic bacteria grown at different temperatures Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-02-03 Volha Akulava, Margarita Smirnova, Dana Byrtusova, Boris Zimmermann, Dag Ekeberg, Achim Kohler, Uladzislau Blazhko, Uladzislau Miamin, Leonid Valentovich, Volha Shapaval
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Complete genome sequence and potential pathogenic assessment of Flavobacterium plurextorum RSG-18 isolated from the gut of Schlegel's black rockfish, Sebastes schlegelii Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-01-31 Jisol Lee, In-Tae Cha, Ki-Eun Lee, Youn Kyoung Son, Seoae Cho, Donghyeok Seol
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Microorganism community structure: A characterisation of agrosystems from Madeira Archipelago Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-01-24 Maria Cristina O. Oliveira, Carla Ragonezi, Sofia Valente, José G. R. de Freitas, Miguel A. A. Pinheiro de Carvalho
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Hiding in plain sight: The discovery of complete genomes of 11 hypothetical spindle-shaped viruses that putatively infect mesophilic ammonia-oxidizing archaea Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-01-23 Yimin Ni, Tianqi Xu, Shuling Yan, Lanming Chen, Yongjie Wang
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Inactivation of siderophore iron-chelating moieties by the fungal wheat root symbiont Pyrenophora biseptata Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-01-19 Katie S. French, Emmanuel Chukwuma, Ilan Linshitz, Kosuke Namba, Owen W. Duckworth, Marc A. Cubeta, Oliver Baars
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Environmental microbiome in the home and daycare settings during the COVID-19 pandemic, and potential risk of non-communicable disease in children Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-01-12 Jill A. McKay, Matthew Crown, Matthew Bashton, David Pearce, Jane A. Entwistle, Vartul Sangal
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Genome-scale metabolic modelling of extremophiles and its applications in astrobiological environments Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-01-09 Nuttapol Noirungsee, Sakunthip Changkhong, Kittiya Phinyo, Chutipong Suwannajak, Nahathai Tanakul, Sahutchai Inwongwan
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Predicted metabolic roles and stress responses provide insights into candidate phyla Hydrogenedentota and Sumerlaeota as members of the rare biosphere in biofilms from various environments Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-01-09 Emilie J. Skoog, Tanja Bosak
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Impacts of plastic-free materials on coral-associated bacterial communities during reef restoration Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2024-01-09 Paige Strudwick, Emma F. Camp, Justin Seymour, Christine Roper, John Edmondson, Lorna Howlett, David J. Suggett
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Environmental processes and health implications potentially mediated by dust-borne bacteria Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-12-27 Pengfei Hu, Yehonatan Sharaby, Ji-Dong Gu, Adi Radian, Naama Lang-Yona
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Halomonas alkaliantarctica as a platform for poly(3-hydroxybutyrate-co-3-hydroxyvalerate) production from biodiesel-derived glycerol Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-12-26 Justyna Możejko-Ciesielska, Krzysztof Moraczewski, Sylwester Czaplicki
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Population-level prokaryotic community structures associated with ferromanganese nodules in the Clarion-Clipperton Zone (Pacific Ocean) revealed by 16S rRNA gene amplicon sequencing Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-12-26 Kento Tominaga, Hiroaki Takebe, Chisato Murakami, Akira Tsune, Takahiko Okamura, Takuji Ikegami, Yosuke Onishi, Ryoma Kamikawa, Takashi Yoshida
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The interaction of climate, plant, and soil factors drives putative soil fungal pathogen diversity and community structure in dry grasslands Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-12-20 Shaoyang Zhang, Dandan Fan, Jianshuang Wu, Xianzhou Zhang, Xuliang Zhuang, Weidong Kong
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Conserved infections and reproductive phenotypes of Wolbachia symbionts in Asian tortrix moths Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-12-09 Hiroshi Arai, Masatoshi Ueda, Tatsuya Hirano, Naoya Akizuki, Shiou-Ruei Lin, Duong Kieu Hanh, Jaka Widada, Muhammad Saifur Rohman, Madoka Nakai, Yasuhisa Kunimi, Le Van Vang, Arman Wijonarko, Maki N. Inoue
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Microbial perspective of inhibited carbon turnover in Tangel humus of the Northern Limestone Alps Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-12-07 Theresa Rzehak, Nadine Praeg, Harald Zink, Alois Simon, Clemens Geitner, Paul Illmer
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A genomic view of environmental and life history controls on microbial nitrogen acquisition strategies Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-12-06 Linta Reji, Romain Darnajoux, Xinning Zhang
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Denitrification in low oxic environments increases the accumulation of nitrogen oxide intermediates and modulates the evolutionary potential of microbial populations Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-11-30 Kohei Takahashi, Mamoru Oshiki, Chujin Ruan, Kana Morinaga, Masanori Toyofuku, Nobuhiko Nomura, David R. Johnson
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The microbial contribution to litter decomposition and plant growth Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-11-29 Changfeng Zhang, Simone de Pasquale, Kyle Hartman, Claire E. Stanley, Roeland L. Berendsen, Marcel G. A. van der Heijden
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Highlighting the limitations of static microplate biofilm assays for industrial biocide effectiveness compared to dynamic flow conditions Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-11-27 Kyle B. Klopper, Elanna Bester, Martha van Schalkwyk, Gideon M. Wolfaardt
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Plasmids in environmental microbes: An annotated selection of World Wide Web sites relevant to the topics in environmental microbiology Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-11-24 Lawrence P. Wackett
Plasmids vary in different environments https://journals.asm.org/doi/epub/10.1128/mbio.03191-22 Most studies of plasmids focus on traits like antibiotic resistance, which account for ~1% of plasmid genes. This study looked broadly at plasmids to better understand their composition and distribution as a function of environment.
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Prolonged water limitation shifts the soil microbiome from copiotrophic to oligotrophic lifestyles in Scots pine mesocosms Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-11-22 Astrid C. H. Jaeger, Martin Hartmann, Rafaela Feola Conz, Johan Six, Emily F. Solly
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Effects of chlorination on the survival of sewage bacteria in seawater microcosms Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-11-21 Mandy Lok Yi Tang, Stanley Chun Kwan Lau
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Characterisation of meropenem-resistant Bacillus sp. FW 1 isolated from biogas digestate Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-11-15 He Sun, Jolanta J. Levenfors, Christian Brandt, Anna Schnürer
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The etherase system of Novosphingobium sp. MBES04 functions as a sensor of lignin fragments through phenylpropanone production to induce specific transcriptional responses Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-11-10 Eri Kumagawa, Madoka Katsumata, Hiroshi Nishimura, Takashi Watanabe, Shun'ichi Ishii, Yukari Ohta
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Consistent spatial patterns in microbial taxa of red squirrel gut microbiomes Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-11-09 Alicia Halhed, Lauren Petrullo, Stan Boutin, Ben Dantzer, Andrew McAdam, Martin Wu, Karl Cottenie
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Whole-cell studies of substrate and inhibitor specificity of isoprene monooxygenase and related enzymes Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-11-07 Leanne Sims, Chloe Wright, Andrew T. Crombie, Robin Dawson, Colin Lockwood, Nick E. Le Brun, Laura Lehtovirta-Morley, J. Colin Murrell
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Bioaerosols in swine confinement buildings: A metaproteomic view Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-11-02 Susann Meyer, Nicole Hüttig, Marianne Zenk, Udo Jäckel, Dierk-Christoph Pöther
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Characterisation of the growth behaviour of Listeria monocytogenes in Listeria synthetic media Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-10-20 Lisa Maria Schulz, Alicia Konrath, Jeanine Rismondo
The foodborne pathogen Listeria monocytogenes can grow in a wide range of environmental conditions. For the study of the physiology of this organism, several chemically defined media have been developed over the past decades. Here, we examined the ability of L. monocytogenes wildtype strains EGD-e and 10403S to grow under salt and pH stress in Listeria synthetic medium (LSM). Furthermore, we determined
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Combatting biofilms in potable water systems: A comprehensive overview to ensuring industrial water safety Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-10-12 Yuanzhe Li, Yunzhuo Qu, Haoyi Yang, Xingxin Zhou, Peng Xiao, Tiancheng Shao
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Self-assembled silk fibroin cross-linked with genipin supplements microbial carbonate precipitation in building material Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-10-09 Jiayu Li, Varenyam Achal
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Role of natural transformation in the evolution of small cryptic plasmids in Synechocystis sp. PCC 6803 Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-10-04 Fabian Nies, Tanita Wein, Dustin M. Hanke, Benjamin L. Springstein, Jaime Alcorta, Claudia Taubenheim, Tal Dagan
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Prokaryote communities associated with different types of tissue formed and substrates inhabited by Serpula lacrymans Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-10-03 Julia Embacher, Susanne Zeilinger, Martin Kirchmair, Sigrid Neuhauser
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Plankton and marine aggregates as transmission vectors for V. aestuarianus 02/041 infecting the pacific oyster Crassostrea gigas Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-09-30 Lapo Doni, Giovanni Tassistro, Caterina Oliveri, Teresa Balbi, Manon Auguste, Alberto Pallavicini, Laura Canesi, Carla Pruzzo, Luigi Vezzulli
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Symbioses of alvinocaridid shrimps from the South West Pacific: No chemosymbiotic diets but conserved gut microbiomes Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-09-26 Pierre Methou, Valérie Cueff-Gauchard, Loïc N. Michel, Nicolas Gayet, Florence Pradillon, Marie-Anne Cambon-Bonavita
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Detection, fate and transport of the biohazardous agent Toxoplasma gondii in soil water systems: Influence of soil physicochemical properties, water chemistry and surfactant Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-09-22 Erin N. Kinsey, Caroline Korte, Sohib Gouasmia, Coralie L'Ollivier, Jitender P. Dubey, Aurélien Dumètre, Christophe J.G. Darnault
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Production and composition of extracellular polymeric substances by a unicellular strain and natural colonies of Microcystis: Impact of salinity and nutrient stress Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-09-11 Océane Reignier, Myriam Bormans, Laetitia Marchand, Corinne Sinquin, Zouher Amzil, Agata Zykwinska, Enora Briand
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Core taxa drive microeukaryotic community stability of a deep subtropical reservoir after complete mixing Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-09-09 Yuanyuan Xue, Huihuang Chen, Peng Xiao, Lei Jin, Ramiro Logares, Jun Yang
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Is the gut microbiome of insects a potential source to meet UN sustainable development goals to eliminate plastic pollution? Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-09-08 Ruqaiyyah Siddiqui, Naveed Ahmed Khan
As insects such as cockroaches can endure high radiation, flourish in unsanitary circumstances, thrive on germ-infested feed, and can even digest the organic polymer cellulose, the gut microbiota of these species likely produces enzymes contributing to their ability to digest a variety of materials. The use of cockroaches as a bio-resource to eliminate plastic is discussed. We explore whether species
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Studying the microbiome of suppressive soils against vascular wilt, caused by Fusarium oxysporum in cape gooseberry (Physalis peruviana) Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-09-07 Daniel Bautista, Diana García, Lorena Dávila, Alejandro Caro-Quintero, Alba Marina Cotes, Adriana González, A. Paola Zuluaga
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Acetogenesis: An annotated selection of World Wide Web sites relevant to the topics in environmental microbiology Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-09-01 Lawrence P. Wackett
Acetogenesis – An overview https://www.sciencedirect.com/topics/engineering/acetogenesis This compendium on acetogenesis focuses on biogas and anaerobic biomass conversions by acetogenic processes.
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Broad time-dependent transcriptional activity of metabolic genes of E. coli O104:H4 strain C227/11Φcu in a soil microenvironment at low temperature Environ. MicroBiol. Rep (IF 3.3) Pub Date : 2023-08-29 Katharina Detert, Jonathan Währer, Kay Nieselt, Herbert Schmidt