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Ni-elimination from the active site of the standard [NiFe]‑hydrogenase upon oxidation by O2
Journal of Inorganic Biochemistry ( IF 3.9 ) Pub Date : 2017-09-14 , DOI: 10.1016/j.jinorgbio.2017.09.011
Koji Nishikawa , Satoko Mochida , Takeshi Hiromoto , Naoki Shibata , Yoshiki Higuchi

Hydrogenase is a key enzyme for a coming hydrogen energy society, because it has strong catalytic activities on both uptake and production of dihydrogen. We, however, have to overcome the sensitivity against O2 of the enzyme, because hydrogenase is, generally, easily inactivated in the presence of O2. In this study, we have revisited the crystal structures of [NiFe]‑hydrogenase from sulfate-reducing bacterium in the several oxidized and reduced conditions. Our results revealed that the Ni‐Fe active site of the enzyme exposed into O2 showed two forms, Form-1 and Form-2. The Ni‐Fe active site in Form-1 showed the typical Ni‐B (inactive ready) structure, whereas those in Form-2 lost Ni with no relation to an exposure time to O2, and two cysteinyl sulfur ligands made a disulfide bond. On the other hand, the formation of sulfenylation of the cysteinyl ligand to Ni, which is often observed in the oxidized form, did not correlate with the Ni-elimination, but with exposure time to O2.



中文翻译:

通过O 2氧化从标准[NiFe]-加氢酶的活性位点消除镍

氢酶是即将到来的氢能社会的关键酶,因为它对二氢的吸收和产生均具有很强的催化活性。但是,我们必须克服对酶O 2的敏感性,因为氢化酶通常在O 2存在下很容易失活。在这项研究中,我们已经重新研究了硫酸盐还原细菌在几种氧化和还原条件下的[NiFe]-加氢酶的晶体结构。我们的结果表明,暴露于O 2的酶的Ni-Fe活性位点表现出两种形式,即形式1和形式2。晶型1中的Ni-Fe活性位点显示出典型的Ni-B(惰性准备就绪)结构,而晶型2中的Ni-Fe活性位点损失了Ni,与O 2的暴露时间无关,两个半胱氨酰硫配体形成一个二硫键。另一方面,通常以氧化形式观察到的半胱氨酰配体的亚磺酰基化成Ni,与消除Ni无关,但与暴露于O 2的时间无关。

更新日期:2017-09-14
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