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Uracil-amino acid as a scaffold for β-sheet peptidomimetics: Study of photophysics and interaction with BSA protein
Bioorganic & Medicinal Chemistry Letters ( IF 2.7 ) Pub Date : 2017-11-10 , DOI: 10.1016/j.bmcl.2017.11.017
Subhendu Sekhar Bag , Afsana Yashmeen

We report herein the uracil-di-aza-amino acid (UrAA) as a new family of molecular scaffold to induce β-hairpin structure with H-bonded β-sheet conformation in a short peptide. This has been demonstrated in two conceptual fluorescent pentapeptides wherein triazolylpyrenyl alanine and/or triazolylmethoxynapthyl alanine (TPyAlaDo and/or TMNapAlaDo) are embedded into two arms of the uracil-amino acid via an intervening leucine. Conformational analysis by CD, IR, variable temperature and 2D NMR spectroscopy reveals the β-hairpin structures for both the peptides. Study of photophysical property reveals that the pentapeptide containing fluorescent triazolyl unnatural amino acids TMNapAlaDo and TPyAlaDo at the two termini exhibits dual path entry to exciplex emission-either via FRET from TMNapAlaDo to TPyAlaDo or via direct excitation of a FRET acceptor, TPyAlaDo. The other pentapeptide with TPyAlaDo/TPyAlaDo pair shows excimer emission. Furthermore, both the peptides maintaining their fundamental photophysics are found to interact with BSA as only a test biomolecule.



中文翻译:

尿嘧啶氨基酸作为β-折叠肽模拟物的支架:光物理及其与BSA蛋白相互作用的研究

我们在此报告尿嘧啶二氮杂-氨基酸(Ú ř AA)作为新的家族分子骨架的诱导β发夹用H-β结合片层构象结构的短肽。这已经在两个概念性荧光五肽中得到证实,其中三唑基吡啶基丙氨酸和/或三唑基甲氧基丙氨酸(TPy Ala Do和/或TMNap Ala Do)通过中间亮氨酸被嵌入到尿嘧啶氨基酸的两个臂中。通过CD,IR,可变温度和2D NMR光谱进行的构象分析揭示了两种肽的β-发夹结构。光物理性质的研究表明,五肽中含有荧光三唑基非天然氨基酸在两个末端的TMNap Ala DoTPy Ala Do表现出向激基复合物发射的双路径进入-通过从TMNap Ala DoTPy Ala Do的FRET或通过FRET受体TPy Ala Do的直接激发。另一对具有TPy Ala Do / TPy Ala Do的五肽显示了受激准分子发射。此外,发现两种维持其基本光物理性质的肽都仅作为测试生物分子与BSA相互作用。

更新日期:2017-11-10
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