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Identification of Biologically Active Pyrimido[5,4-b]indoles That Prolong NF-κB Activation without Intrinsic Activity
ACS Combinatorial Science ( IF 3.903 ) Pub Date : 2017-07-13 00:00:00 , DOI: 10.1021/acscombsci.7b00080
Michael Chan 1 , Alast Ahmadi 1 , Shiyin Yao 1 , Fumi Sato-Kaneko 1 , Karen Messer 2 , Minya Pu 2 , Brandon Nguyen 1 , Tomoko Hayashi 1 , Maripat Corr 3 , Dennis A. Carson 1 , Howard B. Cottam 1 , Nikunj M. Shukla 1
Affiliation  

Most vaccine adjuvants directly stimulate and activate antigen presenting cells but do not sustain immunostimulation of these cells. A high throughput screening (HTS) strategy was designed to identify compounds that would sustain NF-κB activation by a stimulus from the Toll-like receptor (TLR)4 ligand, lipopolysaccharide (LPS). Several pilot studies optimized the parameters and conditions for a cell based NF-κB reporter assay in human monocytic THP-1 cells. The final assay evaluated prolongation of LPS induced NF-κB activation at 12 h. The dynamic range of the assay was confirmed in a pilot screen of 14 631 compounds and subsequently in a main extensive screen with 166 304 compounds. Hit compounds were identified using an enrichment strategy based on unsupervised chemoinformatic clustering, and also by a naı̈ve “Top X” approach. A total of 2011 compounds were then rescreened for levels of coactivation with LPS at 5 h and 12 h, which provided kinetic profiles. Of the 407 confirmed hits, compounds that showed correlation of the kinetic profiles with the structural similarities led to identification of four chemotypes: pyrimido[5,4-b]indoles, 4H-chromene-3-carbonitriles, benzo[d][1,3]dioxol-2-ylureas, and tetrahydrothieno[2,3-c]pyridines, which were segregated by 5 h and 12 h kinetic characteristics. Unlike the TLR4 agonistic pyrimidoindoles identified in previous studies, the revealed pyrimidoindoles in the present work did not intrinsically stimulate TLR4 nor induce NF-κB but rather prolonged NF-κB signaling induced by LPS. A 42-member combinatorial library was synthesized which led to identification of potent N3-alkyl substituted pyrimidoindoles that were not only active in vitro but also enhanced antibody responses in vivo when used as a coadjuvant. The novel HTS strategy led to identification of compounds that are intrinsically quiescent but functionally prolong stimulation by a TLR4 ligand and thereby potentiate vaccine efficacy.

中文翻译:

鉴定可延长无内在活性的NF-κB活化的生物活性嘧啶并[5,4- b ]吲哚

大多数疫苗佐剂直接刺激并激活抗原呈递细胞,但不维持这些细胞的免疫刺激作用。设计了一种高通量筛选(HTS)策略,以鉴定通过Toll样受体(TLR)4配体脂多糖(LPS)的刺激而维持NF-κB活化的化合物。多项先导研究优化了人单核THP-1细胞中基于细胞的NF-κB报告基因检测的参数和条件。最终分析评估了LPS在12 h时诱导的NF-κB活化的延长。测定的动态范围在14 631种化合物的初步筛选中确认,随后在166 304种化合物的主要广泛筛选中确认。可以使用基于无监督化学信息聚类的富集策略和简单的“ Top X”方法来鉴定命中化合物。然后在5小时和12小时重新筛选了总共2011种化合物与LPS的共激活水平,从而提供了动力学特征。在407个已确认的命中物中,显示动力学特征与结构相似性相关的化合物可鉴定出四种化学型:嘧啶[5,4-b ]吲哚,4 H-亚甲基-3-腈,苯并[ d ] [1,3]二氧杂-2-基脲和四氢噻吩并[2,3- c ]吡啶,它们通过5 h和12 h动力学特征分离。与先前研究中确定的TLR4激动嘧啶并吲哚不同,本研究揭示的嘧啶并吲哚并没有内在地刺激TLR4或诱导NF-κB,而是延长了LPS诱导的NF-κB信号传导。合成了一个由42个成员组成的组合文库,该文库可鉴定出有效的N 3-烷基取代的嘧啶并吲哚类化合物,这些化合物不仅在体外具有活性而且在体内具有增强的抗体应答能力当用作辅助剂时。新颖的HTS策略导致鉴定出本质上是静止的但功能上由TLR4配体刺激的化合物,从而增强了疫苗的效力。
更新日期:2017-07-13
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